View in EDS HTML Full Text PDF Full Text

Breaking the reproducibility barrier with standardized protocols for plant-microbiome research.

Saved in:
Bibliographic Details
Title: Breaking the reproducibility barrier with standardized protocols for plant-microbiome research.
Authors: Novak V; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America., Andeer PF; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America., King E; The DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.; Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid (UPM)-Instituto Nacional de Investigación y Tecnología Agraria y Alimentación (INIA/CSIC), Campus de Montegancedo, Madrid, Spain., Calabria J; Faculty of Science, School of BioSciences, The University of Melbourne, Parkville, Australia., Fitzpatrick C; Department of Biology and Howard Hughes Medical Institute, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America., Kelm JM; Institute for Bio- and Geosciences, Plant Sciences (IBG-2), Forschungszentrum Jülich GmbH, Jülich, Germany., Wippel K; Max Planck Institute for Plant Breeding Research, Cologne, Germany.; Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park Amsterdam, Amsterdam, The Netherlands., Kosina SM; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America., Bowen BP; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.; The DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America., Daum C; The DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America., Zane M; The DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America., Yadav A; Earth and Environmental Sciences, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America., Chen M; Earth and Environmental Sciences, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America., Russ D; Department of Biology and Howard Hughes Medical Institute, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America., Adams CA; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.; Department of Plant and Microbial Biology, University of California-Berkeley, Berkeley, California, United States of America., Owens TK; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America., Lee B; The DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.; Department of Plant and Microbial Biology, University of California-Berkeley, Berkeley, California, United States of America., Ding Y; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America., Sordo Z; Computing Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America., Chakraborty R; Earth and Environmental Sciences, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America., Roux S; The DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America., Deutschbauer AM; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.; Department of Plant and Microbial Biology, University of California-Berkeley, Berkeley, California, United States of America., Ushizima D; Computing Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America., Zengler K; Department of Pediatrics, University of California, San Diego, La Jolla, California, United States of America.; Department of Bioengineering, University of California, San Diego, La Jolla, California, United States of America.; Center for Microbiome Innovation, University of California, San Diego, La Jolla, California, United States of America.; Program in Materials Science and Engineering, University of California, San Diego, La Jolla, California, United States of America., Arsova B; Institute for Bio- and Geosciences, Plant Sciences (IBG-2), Forschungszentrum Jülich GmbH, Jülich, Germany., Dangl JL; Department of Biology and Howard Hughes Medical Institute, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America., Schulze-Lefert P; Max Planck Institute for Plant Breeding Research, Cologne, Germany., Watt M; Faculty of Science, School of BioSciences, The University of Melbourne, Parkville, Australia., Vogel JP; The DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America., Northen TR; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.; The DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.
Source: PLoS biology [PLoS Biol] 2025 Sep 08; Vol. 23 (9), pp. e3003358. Date of Electronic Publication: 2025 Sep 08 (Print Publication: 2025).
Publication Type: Journal Article; Multicenter Study
Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101183755 Publication Model: eCollection Cited Medium: Internet ISSN: 1545-7885 (Electronic) Linking ISSN: 15449173 NLM ISO Abbreviation: PLoS Biol Subsets: MEDLINE
Database: MEDLINE Ultimate
Full text is not displayed to guests.
FullText Links:
  – Type: pdflink
Text:
  Availability: 1
Header DbId: mdl
DbLabel: MEDLINE Ultimate
An: 40920748
AccessLevel: 2
PubType: Academic Journal
PubTypeId: academicJournal
PreciseRelevancyScore: 0
IllustrationInfo
Items – Name: Title
  Label: Title
  Group: Ti
  Data: Breaking the reproducibility barrier with standardized protocols for plant-microbiome research.
– Name: Author
  Label: Authors
  Group: Au
  Data: <searchLink fieldCode="AU" term="%22Novak+V%22">Novak V</searchLink>; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Andeer+PF%22">Andeer PF</searchLink>; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.<br /><searchLink fieldCode="AU" term="%22King+E%22">King E</searchLink>; The DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.; Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid (UPM)-Instituto Nacional de Investigación y Tecnología Agraria y Alimentación (INIA/CSIC), Campus de Montegancedo, Madrid, Spain.<br /><searchLink fieldCode="AU" term="%22Calabria+J%22">Calabria J</searchLink>; Faculty of Science, School of BioSciences, The University of Melbourne, Parkville, Australia.<br /><searchLink fieldCode="AU" term="%22Fitzpatrick+C%22">Fitzpatrick C</searchLink>; Department of Biology and Howard Hughes Medical Institute, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.<br /><searchLink fieldCode="AU" term="%22Kelm+JM%22">Kelm JM</searchLink>; Institute for Bio- and Geosciences, Plant Sciences (IBG-2), Forschungszentrum Jülich GmbH, Jülich, Germany.<br /><searchLink fieldCode="AU" term="%22Wippel+K%22">Wippel K</searchLink>; Max Planck Institute for Plant Breeding Research, Cologne, Germany.; Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park Amsterdam, Amsterdam, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Kosina+SM%22">Kosina SM</searchLink>; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Bowen+BP%22">Bowen BP</searchLink>; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.; The DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Daum+C%22">Daum C</searchLink>; The DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Zane+M%22">Zane M</searchLink>; The DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Yadav+A%22">Yadav A</searchLink>; Earth and Environmental Sciences, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Chen+M%22">Chen M</searchLink>; Earth and Environmental Sciences, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Russ+D%22">Russ D</searchLink>; Department of Biology and Howard Hughes Medical Institute, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.<br /><searchLink fieldCode="AU" term="%22Adams+CA%22">Adams CA</searchLink>; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.; Department of Plant and Microbial Biology, University of California-Berkeley, Berkeley, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Owens+TK%22">Owens TK</searchLink>; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Lee+B%22">Lee B</searchLink>; The DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.; Department of Plant and Microbial Biology, University of California-Berkeley, Berkeley, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Ding+Y%22">Ding Y</searchLink>; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Sordo+Z%22">Sordo Z</searchLink>; Computing Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Chakraborty+R%22">Chakraborty R</searchLink>; Earth and Environmental Sciences, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Roux+S%22">Roux S</searchLink>; The DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Deutschbauer+AM%22">Deutschbauer AM</searchLink>; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.; Department of Plant and Microbial Biology, University of California-Berkeley, Berkeley, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Ushizima+D%22">Ushizima D</searchLink>; Computing Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Zengler+K%22">Zengler K</searchLink>; Department of Pediatrics, University of California, San Diego, La Jolla, California, United States of America.; Department of Bioengineering, University of California, San Diego, La Jolla, California, United States of America.; Center for Microbiome Innovation, University of California, San Diego, La Jolla, California, United States of America.; Program in Materials Science and Engineering, University of California, San Diego, La Jolla, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Arsova+B%22">Arsova B</searchLink>; Institute for Bio- and Geosciences, Plant Sciences (IBG-2), Forschungszentrum Jülich GmbH, Jülich, Germany.<br /><searchLink fieldCode="AU" term="%22Dangl+JL%22">Dangl JL</searchLink>; Department of Biology and Howard Hughes Medical Institute, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.<br /><searchLink fieldCode="AU" term="%22Schulze-Lefert+P%22">Schulze-Lefert P</searchLink>; Max Planck Institute for Plant Breeding Research, Cologne, Germany.<br /><searchLink fieldCode="AU" term="%22Watt+M%22">Watt M</searchLink>; Faculty of Science, School of BioSciences, The University of Melbourne, Parkville, Australia.<br /><searchLink fieldCode="AU" term="%22Vogel+JP%22">Vogel JP</searchLink>; The DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Northen+TR%22">Northen TR</searchLink>; Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.; The DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.
– Name: TitleSource
  Label: Source
  Group: Src
  Data: <searchLink fieldCode="JN" term="%22101183755%22">PLoS biology</searchLink> [PLoS Biol] 2025 Sep 08; Vol. 23 (9), pp. e3003358. <i>Date of Electronic Publication: </i>2025 Sep 08 (<i>Print Publication: </i>2025).
– Name: TypePub
  Label: Publication Type
  Group: TypPub
  Data: Journal Article; Multicenter Study
– Name: TitleSource
  Label: Journal Info
  Group: Src
  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Public+Library+of+Science%22">Public Library of Science </searchLink><i>Country of Publication: </i>United States <i>NLM ID: </i>101183755 <i>Publication Model: </i>eCollection <i>Cited Medium: </i>Internet <i>ISSN: </i>1545-7885 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2215449173%22">15449173 </searchLink><i>NLM ISO Abbreviation: </i>PLoS Biol <i>Subsets: </i>MEDLINE
PLink https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=40920748
RecordInfo BibRecord:
  BibEntity:
    Identifiers:
      – Type: doi
        Value: 10.1371/journal.pbio.3003358
    Languages:
      – Code: eng
        Text: English
    PhysicalDescription:
      Pagination:
        StartPage: e3003358
    Titles:
      – TitleFull: Breaking the reproducibility barrier with standardized protocols for plant-microbiome research.
        Type: main
  BibRelationships:
    HasContributorRelationships:
      – PersonEntity:
          Name:
            NameFull: Novak V
      – PersonEntity:
          Name:
            NameFull: Andeer PF
      – PersonEntity:
          Name:
            NameFull: King E
      – PersonEntity:
          Name:
            NameFull: Calabria J
      – PersonEntity:
          Name:
            NameFull: Fitzpatrick C
      – PersonEntity:
          Name:
            NameFull: Kelm JM
      – PersonEntity:
          Name:
            NameFull: Wippel K
      – PersonEntity:
          Name:
            NameFull: Kosina SM
      – PersonEntity:
          Name:
            NameFull: Bowen BP
      – PersonEntity:
          Name:
            NameFull: Daum C
      – PersonEntity:
          Name:
            NameFull: Zane M
      – PersonEntity:
          Name:
            NameFull: Yadav A
      – PersonEntity:
          Name:
            NameFull: Chen M
      – PersonEntity:
          Name:
            NameFull: Russ D
      – PersonEntity:
          Name:
            NameFull: Adams CA
      – PersonEntity:
          Name:
            NameFull: Owens TK
      – PersonEntity:
          Name:
            NameFull: Lee B
      – PersonEntity:
          Name:
            NameFull: Ding Y
      – PersonEntity:
          Name:
            NameFull: Sordo Z
      – PersonEntity:
          Name:
            NameFull: Chakraborty R
      – PersonEntity:
          Name:
            NameFull: Roux S
      – PersonEntity:
          Name:
            NameFull: Deutschbauer AM
      – PersonEntity:
          Name:
            NameFull: Ushizima D
      – PersonEntity:
          Name:
            NameFull: Zengler K
      – PersonEntity:
          Name:
            NameFull: Arsova B
      – PersonEntity:
          Name:
            NameFull: Dangl JL
      – PersonEntity:
          Name:
            NameFull: Schulze-Lefert P
      – PersonEntity:
          Name:
            NameFull: Watt M
      – PersonEntity:
          Name:
            NameFull: Vogel JP
      – PersonEntity:
          Name:
            NameFull: Northen TR
    IsPartOfRelationships:
      – BibEntity:
          Dates:
            – D: 08
              M: 09
              Text: 2025 Sep 08
              Type: published
              Y: 2025
          Identifiers:
            – Type: issn-electronic
              Value: 1545-7885
          Numbering:
            – Type: volume
              Value: 23
            – Type: issue
              Value: 9
          Titles:
            – TitleFull: PLoS biology
              Type: main
ResultId 1