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Pan-modification profiling facilitates a cross-evolutionary dissection of the thermoregulated ribosomal epitranscriptome.

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Title: Pan-modification profiling facilitates a cross-evolutionary dissection of the thermoregulated ribosomal epitranscriptome.
Authors: Garcia-Campos MA; Department of Molecular Genetics, Weizmann Institute of Science, Rehovot 7610001, Israel., Georgeson J; Department of Molecular Genetics, Weizmann Institute of Science, Rehovot 7610001, Israel., Nir R; Department of Molecular Genetics, Weizmann Institute of Science, Rehovot 7610001, Israel., Reichelt R; Institute of Microbiology & Archaea Centre, Single-Molecule Biochemistry Lab, Regensburg Center for Biochemistry (RCB), University of Regensburg, 93053 Regensburg, Germany., Fluke KA; Department of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO 80523, USA., Matzov D; Department of Chemical and Structural Biology, Weizmann Institute of Science, Rehovot 7610001, Israel., Iyer V; Department of Molecular Genetics, Weizmann Institute of Science, Rehovot 7610001, Israel., Burkhart BW; Department of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO 80523, USA., Lui L; Molecular Ecosystems Biology Department, Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA., Kustanovich A; Department of Molecular Genetics, Weizmann Institute of Science, Rehovot 7610001, Israel., Grünberger F; Institute of Microbiology & Archaea Centre, Single-Molecule Biochemistry Lab, Regensburg Center for Biochemistry (RCB), University of Regensburg, 93053 Regensburg, Germany., Thalalla-Gamage S; Chemical Biology Laboratory, National Cancer Institute, Frederick, MD, USA., Howpay-Manage SA; Chemical Biology Laboratory, National Cancer Institute, Frederick, MD, USA., Gerovac M; Faculty of Medicine, Institute for Molecular Infection Biology (IMIB), Helmholtz Institute for RNA-based Infection Research (HIRI), Helmholtz Centre for Infection Research (HZI), University of Würzburg, 97080 Würzburg, Germany., Alexandre N; Regensburg Centre for Biochemistry, Biochemistry III-Institute for Biochemistry, Genetics and Microbiology, University of Regensburg, Universitätsstraße 31, 93053 Regensburg, Germany., Nobe Y; Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, Hachioji-shi, Tokyo 192-0397, Japan., Nowak JS; Malopolska Centre of Biotechnology, Jagiellonian University, 30-387 Krakow, Poland., Perera M; Department of Chemistry and Health Research Institute, Michigan Technological University, 1400 Townsend Drive, Houghton, MI, USA., Apostle A; Department of Chemistry and Health Research Institute, Michigan Technological University, 1400 Townsend Drive, Houghton, MI, USA., Fang S; Department of Chemistry and Health Research Institute, Michigan Technological University, 1400 Townsend Drive, Houghton, MI, USA., Glatt S; Malopolska Centre of Biotechnology, Jagiellonian University, 30-387 Krakow, Poland; Department of Biological Sciences and Pathobiology, University of Veterinary Medicine Vienna, 1210 Vienna, Austria., Jona G; Bacteriology & Genomic Repository Unit, Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot 7610001, Israel., Ferreira-Cerca S; Regensburg Centre for Biochemistry, Biochemistry III-Institute for Biochemistry, Genetics and Microbiology, University of Regensburg, Universitätsstraße 31, 93053 Regensburg, Germany; Laboratoire de Biologie Structurale de la Cellule (BIOC), UMR 7654-CNRS, École polytechnique, Institut Polytechnique de Paris, Route de Saclay, 91128 Palaiseau, France., Vogel J; Faculty of Medicine, Institute for Molecular Infection Biology (IMIB), Helmholtz Institute for RNA-based Infection Research (HIRI), Helmholtz Centre for Infection Research (HZI), University of Würzburg, 97080 Würzburg, Germany., Taoka M; Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, Hachioji-shi, Tokyo 192-0397, Japan., Meier JL; Chemical Biology Laboratory, National Cancer Institute, Frederick, MD, USA., Westhof E; Architecture et Réactivité de l'ARN, Université de Strasbourg, Institut de biologie moléculaire et cellulaire du CNRS, Strasbourg 67084, France; Engineering Research Center of Clinical Functional Materials and Diagnosis & Treatment Devices of Zhejiang Province, Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, China., Santangelo TJ; Department of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO 80523, USA., Grohmann D; Institute of Microbiology & Archaea Centre, Single-Molecule Biochemistry Lab, Regensburg Center for Biochemistry (RCB), University of Regensburg, 93053 Regensburg, Germany., Shalev-Benami M; Department of Chemical and Structural Biology, Weizmann Institute of Science, Rehovot 7610001, Israel. Electronic address: moransb@weizmann.ac.il., Schwartz S; Department of Molecular Genetics, Weizmann Institute of Science, Rehovot 7610001, Israel. Electronic address: schwartz@weizmann.ac.il.
Source: Cell [Cell] 2025 Nov 26; Vol. 188 (24), pp. 6825-6844.e28. Date of Electronic Publication: 2025 Oct 22.
Publication Type: Journal Article
Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 0413066 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-4172 (Electronic) Linking ISSN: 00928674 NLM ISO Abbreviation: Cell Subsets: MEDLINE
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  Data: Pan-modification profiling facilitates a cross-evolutionary dissection of the thermoregulated ribosomal epitranscriptome.
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  Data: <searchLink fieldCode="AU" term="%22Garcia-Campos+MA%22">Garcia-Campos MA</searchLink>; Department of Molecular Genetics, Weizmann Institute of Science, Rehovot 7610001, Israel.<br /><searchLink fieldCode="AU" term="%22Georgeson+J%22">Georgeson J</searchLink>; Department of Molecular Genetics, Weizmann Institute of Science, Rehovot 7610001, Israel.<br /><searchLink fieldCode="AU" term="%22Nir+R%22">Nir R</searchLink>; Department of Molecular Genetics, Weizmann Institute of Science, Rehovot 7610001, Israel.<br /><searchLink fieldCode="AU" term="%22Reichelt+R%22">Reichelt R</searchLink>; Institute of Microbiology & Archaea Centre, Single-Molecule Biochemistry Lab, Regensburg Center for Biochemistry (RCB), University of Regensburg, 93053 Regensburg, Germany.<br /><searchLink fieldCode="AU" term="%22Fluke+KA%22">Fluke KA</searchLink>; Department of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO 80523, USA.<br /><searchLink fieldCode="AU" term="%22Matzov+D%22">Matzov D</searchLink>; Department of Chemical and Structural Biology, Weizmann Institute of Science, Rehovot 7610001, Israel.<br /><searchLink fieldCode="AU" term="%22Iyer+V%22">Iyer V</searchLink>; Department of Molecular Genetics, Weizmann Institute of Science, Rehovot 7610001, Israel.<br /><searchLink fieldCode="AU" term="%22Burkhart+BW%22">Burkhart BW</searchLink>; Department of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO 80523, USA.<br /><searchLink fieldCode="AU" term="%22Lui+L%22">Lui L</searchLink>; Molecular Ecosystems Biology Department, Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.<br /><searchLink fieldCode="AU" term="%22Kustanovich+A%22">Kustanovich A</searchLink>; Department of Molecular Genetics, Weizmann Institute of Science, Rehovot 7610001, Israel.<br /><searchLink fieldCode="AU" term="%22Grünberger+F%22">Grünberger F</searchLink>; Institute of Microbiology & Archaea Centre, Single-Molecule Biochemistry Lab, Regensburg Center for Biochemistry (RCB), University of Regensburg, 93053 Regensburg, Germany.<br /><searchLink fieldCode="AU" term="%22Thalalla-Gamage+S%22">Thalalla-Gamage S</searchLink>; Chemical Biology Laboratory, National Cancer Institute, Frederick, MD, USA.<br /><searchLink fieldCode="AU" term="%22Howpay-Manage+SA%22">Howpay-Manage SA</searchLink>; Chemical Biology Laboratory, National Cancer Institute, Frederick, MD, USA.<br /><searchLink fieldCode="AU" term="%22Gerovac+M%22">Gerovac M</searchLink>; Faculty of Medicine, Institute for Molecular Infection Biology (IMIB), Helmholtz Institute for RNA-based Infection Research (HIRI), Helmholtz Centre for Infection Research (HZI), University of Würzburg, 97080 Würzburg, Germany.<br /><searchLink fieldCode="AU" term="%22Alexandre+N%22">Alexandre N</searchLink>; Regensburg Centre for Biochemistry, Biochemistry III-Institute for Biochemistry, Genetics and Microbiology, University of Regensburg, Universitätsstraße 31, 93053 Regensburg, Germany.<br /><searchLink fieldCode="AU" term="%22Nobe+Y%22">Nobe Y</searchLink>; Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, Hachioji-shi, Tokyo 192-0397, Japan.<br /><searchLink fieldCode="AU" term="%22Nowak+JS%22">Nowak JS</searchLink>; Malopolska Centre of Biotechnology, Jagiellonian University, 30-387 Krakow, Poland.<br /><searchLink fieldCode="AU" term="%22Perera+M%22">Perera M</searchLink>; Department of Chemistry and Health Research Institute, Michigan Technological University, 1400 Townsend Drive, Houghton, MI, USA.<br /><searchLink fieldCode="AU" term="%22Apostle+A%22">Apostle A</searchLink>; Department of Chemistry and Health Research Institute, Michigan Technological University, 1400 Townsend Drive, Houghton, MI, USA.<br /><searchLink fieldCode="AU" term="%22Fang+S%22">Fang S</searchLink>; Department of Chemistry and Health Research Institute, Michigan Technological University, 1400 Townsend Drive, Houghton, MI, USA.<br /><searchLink fieldCode="AU" term="%22Glatt+S%22">Glatt S</searchLink>; Malopolska Centre of Biotechnology, Jagiellonian University, 30-387 Krakow, Poland; Department of Biological Sciences and Pathobiology, University of Veterinary Medicine Vienna, 1210 Vienna, Austria.<br /><searchLink fieldCode="AU" term="%22Jona+G%22">Jona G</searchLink>; Bacteriology & Genomic Repository Unit, Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot 7610001, Israel.<br /><searchLink fieldCode="AU" term="%22Ferreira-Cerca+S%22">Ferreira-Cerca S</searchLink>; Regensburg Centre for Biochemistry, Biochemistry III-Institute for Biochemistry, Genetics and Microbiology, University of Regensburg, Universitätsstraße 31, 93053 Regensburg, Germany; Laboratoire de Biologie Structurale de la Cellule (BIOC), UMR 7654-CNRS, École polytechnique, Institut Polytechnique de Paris, Route de Saclay, 91128 Palaiseau, France.<br /><searchLink fieldCode="AU" term="%22Vogel+J%22">Vogel J</searchLink>; Faculty of Medicine, Institute for Molecular Infection Biology (IMIB), Helmholtz Institute for RNA-based Infection Research (HIRI), Helmholtz Centre for Infection Research (HZI), University of Würzburg, 97080 Würzburg, Germany.<br /><searchLink fieldCode="AU" term="%22Taoka+M%22">Taoka M</searchLink>; Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, Hachioji-shi, Tokyo 192-0397, Japan.<br /><searchLink fieldCode="AU" term="%22Meier+JL%22">Meier JL</searchLink>; Chemical Biology Laboratory, National Cancer Institute, Frederick, MD, USA.<br /><searchLink fieldCode="AU" term="%22Westhof+E%22">Westhof E</searchLink>; Architecture et Réactivité de l'ARN, Université de Strasbourg, Institut de biologie moléculaire et cellulaire du CNRS, Strasbourg 67084, France; Engineering Research Center of Clinical Functional Materials and Diagnosis & Treatment Devices of Zhejiang Province, Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, China.<br /><searchLink fieldCode="AU" term="%22Santangelo+TJ%22">Santangelo TJ</searchLink>; Department of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO 80523, USA.<br /><searchLink fieldCode="AU" term="%22Grohmann+D%22">Grohmann D</searchLink>; Institute of Microbiology & Archaea Centre, Single-Molecule Biochemistry Lab, Regensburg Center for Biochemistry (RCB), University of Regensburg, 93053 Regensburg, Germany.<br /><searchLink fieldCode="AU" term="%22Shalev-Benami+M%22">Shalev-Benami M</searchLink>; Department of Chemical and Structural Biology, Weizmann Institute of Science, Rehovot 7610001, Israel. 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  Data: <searchLink fieldCode="JN" term="%220413066%22">Cell</searchLink> [Cell] 2025 Nov 26; Vol. 188 (24), pp. 6825-6844.e28. <i>Date of Electronic Publication: </i>2025 Oct 22.
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