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Lessons learned: Recommendations for reproducible paleogenomic data analyses.

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Title: Lessons learned: Recommendations for reproducible paleogenomic data analyses.
Authors: Souilmi Y; Australian Centre for Ancient DNA, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia; The Environment Institute, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia; National Centre for Indigenous Genomics, John Curtin School of Medical Research, Australian National University, Acton, ACT 2601, Australia; Indigenous Genomics, The Kids Research Institute Australia, Adelaide, SA 5000, Australia. Electronic address: yassine.souilmi@adelaide.edu.au., Oliva A; Australian Centre for Ancient DNA, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia; Australian e-Health Research Centre, Commonwealth Scientific and Industrial Research Organisation, Level 3/160 Hawkesbury Road, Westmead, NSW 2145, Australia., Davidson R; Australian Centre for Ancient DNA, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia., Williams MP; Australian Centre for Ancient DNA, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia; Department of Biology, The Pennsylvania State University, University Park, PA 16802, USA., Ravishankar S; Australian Centre for Ancient DNA, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia., Roca-Rada X; Australian Centre for Ancient DNA, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia., Peréz V; Australian Centre for Ancient DNA, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia., Tobler R; Australian Centre for Ancient DNA, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia; Evolution of Cultural Diversity Initiative, School of Culture, History and Language, College of Asia and Pacific, Australian National University, Acton, ACT 2601, Australia; Australian Research Council Centre of Excellence for Indigenous and Environmental Histories and Futures, School of Culture, History and Language, College of Asia and Pacific, Australian National University, Acton, ACT 2601, Australia., Llamas B; Australian Centre for Ancient DNA, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia; The Environment Institute, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia; National Centre for Indigenous Genomics, John Curtin School of Medical Research, Australian National University, Acton, ACT 2601, Australia; Indigenous Genomics, The Kids Research Institute Australia, Adelaide, SA 5000, Australia; Australian Research Council Centre of Excellence for Australian Biodiversity and Heritage, The University of Adelaide, Adelaide, SA 5005, Australia. Electronic address: bastien.llamas@adelaide.edu.au.
Source: American journal of human genetics [Am J Hum Genet] 2025 Dec 04; Vol. 112 (12), pp. 2830-2841. Date of Electronic Publication: 2025 Nov 05.
Publication Type: Journal Article; Review; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 0370475 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1537-6605 (Electronic) Linking ISSN: 00029297 NLM ISO Abbreviation: Am J Hum Genet Subsets: MEDLINE
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  Data: Lessons learned: Recommendations for reproducible paleogenomic data analyses.
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  Data: <searchLink fieldCode="AU" term="%22Souilmi+Y%22">Souilmi Y</searchLink>; Australian Centre for Ancient DNA, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia; The Environment Institute, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia; National Centre for Indigenous Genomics, John Curtin School of Medical Research, Australian National University, Acton, ACT 2601, Australia; Indigenous Genomics, The Kids Research Institute Australia, Adelaide, SA 5000, Australia. Electronic address: yassine.souilmi@adelaide.edu.au.<br /><searchLink fieldCode="AU" term="%22Oliva+A%22">Oliva A</searchLink>; Australian Centre for Ancient DNA, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia; Australian e-Health Research Centre, Commonwealth Scientific and Industrial Research Organisation, Level 3/160 Hawkesbury Road, Westmead, NSW 2145, Australia.<br /><searchLink fieldCode="AU" term="%22Davidson+R%22">Davidson R</searchLink>; Australian Centre for Ancient DNA, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia.<br /><searchLink fieldCode="AU" term="%22Williams+MP%22">Williams MP</searchLink>; Australian Centre for Ancient DNA, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia; Department of Biology, The Pennsylvania State University, University Park, PA 16802, USA.<br /><searchLink fieldCode="AU" term="%22Ravishankar+S%22">Ravishankar S</searchLink>; Australian Centre for Ancient DNA, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia.<br /><searchLink fieldCode="AU" term="%22Roca-Rada+X%22">Roca-Rada X</searchLink>; Australian Centre for Ancient DNA, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia.<br /><searchLink fieldCode="AU" term="%22Peréz+V%22">Peréz V</searchLink>; Australian Centre for Ancient DNA, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia.<br /><searchLink fieldCode="AU" term="%22Tobler+R%22">Tobler R</searchLink>; Australian Centre for Ancient DNA, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia; Evolution of Cultural Diversity Initiative, School of Culture, History and Language, College of Asia and Pacific, Australian National University, Acton, ACT 2601, Australia; Australian Research Council Centre of Excellence for Indigenous and Environmental Histories and Futures, School of Culture, History and Language, College of Asia and Pacific, Australian National University, Acton, ACT 2601, Australia.<br /><searchLink fieldCode="AU" term="%22Llamas+B%22">Llamas B</searchLink>; Australian Centre for Ancient DNA, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia; The Environment Institute, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5005, Australia; National Centre for Indigenous Genomics, John Curtin School of Medical Research, Australian National University, Acton, ACT 2601, Australia; Indigenous Genomics, The Kids Research Institute Australia, Adelaide, SA 5000, Australia; Australian Research Council Centre of Excellence for Australian Biodiversity and Heritage, The University of Adelaide, Adelaide, SA 5005, Australia. Electronic address: bastien.llamas@adelaide.edu.au.
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