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Carbapenem-resistant Acinetobacter baumannii at a hospital in Botswana: detecting a protracted outbreak using whole genome sequencing.

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Title: Carbapenem-resistant Acinetobacter baumannii at a hospital in Botswana: detecting a protracted outbreak using whole genome sequencing.
Authors: Strysko J; Department of Paediatric & Adolescent Health, Faculties of Medicine & Health Sciences, University of Botswana, Gaborone, Botswana.; Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.; Botswana-University of Pennsylvania Partnership, Gaborone, Botswana.; Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA., Thela T; Ministry of Health and Wellness, Gaborone, Botswana., Feder A; Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA., Thubuka J; Ministry of Health and Wellness, Gaborone, Botswana., Machiya T; Ministry of Health and Wellness, Gaborone, Botswana., Mkubwa J; Ministry of Health and Wellness, Gaborone, Botswana., Mochankana K; Ministry of Health and Wellness, Gaborone, Botswana., Tiroyakgosi C; Ministry of Health and Wellness, Gaborone, Botswana., Kgomanyane K; Ministry of Health and Wellness, Gaborone, Botswana., Ntereke TD; Botswana-University of Pennsylvania Partnership, Gaborone, Botswana., Zankere T; Botswana-University of Pennsylvania Partnership, Gaborone, Botswana., Lechiile K; Botswana-University of Pennsylvania Partnership, Gaborone, Botswana.; Department of School of Allied Health Professions, Faculties of Medicine & Health Sciences, University of Botswana, Gaborone, Botswana., Gatonye T; Botswana-University of Pennsylvania Partnership, Gaborone, Botswana.; Biomedical Sciences, Faculties of Medicine & Health Sciences, University of Botswana, Gaborone, Botswana., Tembo CV; Botswana-University of Pennsylvania Partnership, Gaborone, Botswana., Vurayai M; Biomedical Sciences, Faculties of Medicine & Health Sciences, University of Botswana, Gaborone, Botswana., Mannathoko N; Biomedical Sciences, Faculties of Medicine & Health Sciences, University of Botswana, Gaborone, Botswana., Mokomane M; Department of School of Allied Health Professions, Faculties of Medicine & Health Sciences, University of Botswana, Gaborone, Botswana., Moustafa AM; Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.; Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia, Canada., Goldfarb DM; Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia, Canada., Richard-Greenblatt M; The Hospital for Sick Children, Toronto, Ontario, Canada.; Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, Canada., McGann C; Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.; Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA., Coffin SE; Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.; Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA., Nakstad B; Department of Paediatric & Adolescent Health, Faculties of Medicine & Health Sciences, University of Botswana, Gaborone, Botswana., Cancedda C; Botswana-University of Pennsylvania Partnership, Gaborone, Botswana.; Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA., Lautenbach E; Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia, Canada., Bogoshi D; National Institute for Communicable Diseases, Johannesburg, South Africa., Smith AM; National Institute for Communicable Diseases, Johannesburg, South Africa.; Department of Medical Microbiology, Faculty of Health Sciences, University of Pretoria, Pretoria, South Africa., Planet PJ; Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.; Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Source: Microbiology spectrum [Microbiol Spectr] 2026 Jan 06; Vol. 14 (1), pp. e0176825. Date of Electronic Publication: 2025 Nov 17.
Publication Type: Journal Article
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  Data: Carbapenem-resistant Acinetobacter baumannii at a hospital in Botswana: detecting a protracted outbreak using whole genome sequencing.
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  Data: <searchLink fieldCode="AU" term="%22Strysko+J%22">Strysko J</searchLink>; Department of Paediatric & Adolescent Health, Faculties of Medicine & Health Sciences, University of Botswana, Gaborone, Botswana.; Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.; Botswana-University of Pennsylvania Partnership, Gaborone, Botswana.; Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.<br /><searchLink fieldCode="AU" term="%22Thela+T%22">Thela T</searchLink>; Ministry of Health and Wellness, Gaborone, Botswana.<br /><searchLink fieldCode="AU" term="%22Feder+A%22">Feder A</searchLink>; Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.<br /><searchLink fieldCode="AU" term="%22Thubuka+J%22">Thubuka J</searchLink>; Ministry of Health and Wellness, Gaborone, Botswana.<br /><searchLink fieldCode="AU" term="%22Machiya+T%22">Machiya T</searchLink>; Ministry of Health and Wellness, Gaborone, Botswana.<br /><searchLink fieldCode="AU" term="%22Mkubwa+J%22">Mkubwa J</searchLink>; Ministry of Health and Wellness, Gaborone, Botswana.<br /><searchLink fieldCode="AU" term="%22Mochankana+K%22">Mochankana K</searchLink>; Ministry of Health and Wellness, Gaborone, Botswana.<br /><searchLink fieldCode="AU" term="%22Tiroyakgosi+C%22">Tiroyakgosi C</searchLink>; Ministry of Health and Wellness, Gaborone, Botswana.<br /><searchLink fieldCode="AU" term="%22Kgomanyane+K%22">Kgomanyane K</searchLink>; Ministry of Health and Wellness, Gaborone, Botswana.<br /><searchLink fieldCode="AU" term="%22Ntereke+TD%22">Ntereke TD</searchLink>; Botswana-University of Pennsylvania Partnership, Gaborone, Botswana.<br /><searchLink fieldCode="AU" term="%22Zankere+T%22">Zankere T</searchLink>; Botswana-University of Pennsylvania Partnership, Gaborone, Botswana.<br /><searchLink fieldCode="AU" term="%22Lechiile+K%22">Lechiile K</searchLink>; Botswana-University of Pennsylvania Partnership, Gaborone, Botswana.; Department of School of Allied Health Professions, Faculties of Medicine & Health Sciences, University of Botswana, Gaborone, Botswana.<br /><searchLink fieldCode="AU" term="%22Gatonye+T%22">Gatonye T</searchLink>; Botswana-University of Pennsylvania Partnership, Gaborone, Botswana.; Biomedical Sciences, Faculties of Medicine & Health Sciences, University of Botswana, Gaborone, Botswana.<br /><searchLink fieldCode="AU" term="%22Tembo+CV%22">Tembo CV</searchLink>; Botswana-University of Pennsylvania Partnership, Gaborone, Botswana.<br /><searchLink fieldCode="AU" term="%22Vurayai+M%22">Vurayai M</searchLink>; Biomedical Sciences, Faculties of Medicine & Health Sciences, University of Botswana, Gaborone, Botswana.<br /><searchLink fieldCode="AU" term="%22Mannathoko+N%22">Mannathoko N</searchLink>; Biomedical Sciences, Faculties of Medicine & Health Sciences, University of Botswana, Gaborone, Botswana.<br /><searchLink fieldCode="AU" term="%22Mokomane+M%22">Mokomane M</searchLink>; Department of School of Allied Health Professions, Faculties of Medicine & Health Sciences, University of Botswana, Gaborone, Botswana.<br /><searchLink fieldCode="AU" term="%22Moustafa+AM%22">Moustafa AM</searchLink>; Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.; Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia, Canada.<br /><searchLink fieldCode="AU" term="%22Goldfarb+DM%22">Goldfarb DM</searchLink>; Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia, Canada.<br /><searchLink fieldCode="AU" term="%22Richard-Greenblatt+M%22">Richard-Greenblatt M</searchLink>; The Hospital for Sick Children, Toronto, Ontario, Canada.; Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, Canada.<br /><searchLink fieldCode="AU" term="%22McGann+C%22">McGann C</searchLink>; Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.; Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.<br /><searchLink fieldCode="AU" term="%22Coffin+SE%22">Coffin SE</searchLink>; Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.; Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.<br /><searchLink fieldCode="AU" term="%22Nakstad+B%22">Nakstad B</searchLink>; Department of Paediatric & Adolescent Health, Faculties of Medicine & Health Sciences, University of Botswana, Gaborone, Botswana.<br /><searchLink fieldCode="AU" term="%22Cancedda+C%22">Cancedda C</searchLink>; Botswana-University of Pennsylvania Partnership, Gaborone, Botswana.; Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.<br /><searchLink fieldCode="AU" term="%22Lautenbach+E%22">Lautenbach E</searchLink>; Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia, Canada.<br /><searchLink fieldCode="AU" term="%22Bogoshi+D%22">Bogoshi D</searchLink>; National Institute for Communicable Diseases, Johannesburg, South Africa.<br /><searchLink fieldCode="AU" term="%22Smith+AM%22">Smith AM</searchLink>; National Institute for Communicable Diseases, Johannesburg, South Africa.; Department of Medical Microbiology, Faculty of Health Sciences, University of Pretoria, Pretoria, South Africa.<br /><searchLink fieldCode="AU" term="%22Planet+PJ%22">Planet PJ</searchLink>; Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.; Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
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