BV-BRC: a unified bacterial and viral bioinformatics resource with expanded functionality and AI integration.
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| Title: | BV-BRC: a unified bacterial and viral bioinformatics resource with expanded functionality and AI integration. |
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| Authors: | Shukla M; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States., Wattam AR; Biocomplexity Institute, University of Virginia, Charlottesville, VA 22904, United States., Aleman A; Biocomplexity Institute, University of Virginia, Charlottesville, VA 22904, United States., Bhattacharya R; Department of Informatics, J. Craig Venter Institute, La Jolla, CA 92037, United States., Bowers N; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States., Brettin T; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Computing Environment and Life Sciences, Argonne National Laboratory, Argonne, IL 60439, United States., Capria A; Department of Informatics, J. Craig Venter Institute, La Jolla, CA 92037, United States., Chia N; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States., Cucinell C; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States., Davis JJ; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States., Dempsey DM; Department of Microbiology, University of Alabama at Birmingham, Birmingham, AL 35294, United States., Dickerman A; Biocomplexity Institute, University of Virginia, Charlottesville, VA 22904, United States., Dietrich EM; Computing Environment and Life Sciences, Argonne National Laboratory, Argonne, IL 60439, United States., Gokdemir O; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States.; Department of Computer Science, University of Chicago, Chicago, IL 60637, United States., Hendrickson RC; Department of Microbiology, University of Alabama at Birmingham, Birmingham, AL 35294, United States., Kenyon RW; Biocomplexity Institute, University of Virginia, Charlottesville, VA 22904, United States., Klahn B; Biocomplexity Institute, University of Virginia, Charlottesville, VA 22904, United States., Kuscuoglu M; Department of Informatics, J. Craig Venter Institute, La Jolla, CA 92037, United States., Lefkowitz EJ; Department of Microbiology, University of Alabama at Birmingham, Birmingham, AL 35294, United States., Ma H; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States., Machi D; Biocomplexity Institute, University of Virginia, Charlottesville, VA 22904, United States., Macken C; Department of Statistics, University of Auckland, Auckland 1010, New Zealand., Mann CM; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States., Mao C; Biocomplexity Institute, University of Virginia, Charlottesville, VA 22904, United States., Nguyen M; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States., Olsen GJ; Department of Microbiology, University of Illinois, Urbana, IL 61801, United States., Olson RD; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States., Overbeek R; Fellowship for Interpretation of Genomes, Burr Ridge, IL 60527, United States., Owens SM; Biosciences Division, Argonne National Laboratory, Argonne, IL 60439, United States., Parrello B; Department of Computer Science, University of Chicago, Chicago, IL 60637, United States., Poretsky R; Department of Biological Sciences, University of Illinois Chicago, Chicago, IL 60607, United States., Pusch GD; Fellowship for Interpretation of Genomes, Burr Ridge, IL 60527, United States., Ramanathan A; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States., Sheriff JT; Department of Biological Sciences, University of Illinois Chicago, Chicago, IL 60607, United States., Singh I; J. Craig Venter Institute, Rockville, MD 20850, United States., Stewart L; Department of Informatics, J. Craig Venter Institute, La Jolla, CA 92037, United States., VanOeffelen M; Fellowship for Interpretation of Genomes, Burr Ridge, IL 60527, United States., Vonstein V; Fellowship for Interpretation of Genomes, Burr Ridge, IL 60527, United States., Warren AS; Biocomplexity Institute, University of Virginia, Charlottesville, VA 22904, United States., Wilke A; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States., Zmasek CM; Department of Informatics, J. Craig Venter Institute, La Jolla, CA 92037, United States., Zuniga A; Department of Informatics, J. Craig Venter Institute, La Jolla, CA 92037, United States., Stevens RL; Computing Environment and Life Sciences, Argonne National Laboratory, Argonne, IL 60439, United States.; Department of Computer Science, University of Chicago, Chicago, IL 60637, United States. |
| Source: | Nucleic acids research [Nucleic Acids Res] 2026 Jan 06; Vol. 54 (D1), pp. D715-D723. |
| Publication Type: | Journal Article |
| Journal Info: | Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
| FullText | Text: Availability: 0 |
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| Header | DbId: mdl DbLabel: MEDLINE Ultimate An: 41251138 AccessLevel: 2 PubType: Academic Journal PubTypeId: academicJournal PreciseRelevancyScore: 0 |
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| Items | – Name: Title Label: Title Group: Ti Data: BV-BRC: a unified bacterial and viral bioinformatics resource with expanded functionality and AI integration. – Name: Author Label: Authors Group: Au Data: <searchLink fieldCode="AU" term="%22Shukla+M%22">Shukla M</searchLink>; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States.<br /><searchLink fieldCode="AU" term="%22Wattam+AR%22">Wattam AR</searchLink>; Biocomplexity Institute, University of Virginia, Charlottesville, VA 22904, United States.<br /><searchLink fieldCode="AU" term="%22Aleman+A%22">Aleman A</searchLink>; Biocomplexity Institute, University of Virginia, Charlottesville, VA 22904, United States.<br /><searchLink fieldCode="AU" term="%22Bhattacharya+R%22">Bhattacharya R</searchLink>; Department of Informatics, J. Craig Venter Institute, La Jolla, CA 92037, United States.<br /><searchLink fieldCode="AU" term="%22Bowers+N%22">Bowers N</searchLink>; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States.<br /><searchLink fieldCode="AU" term="%22Brettin+T%22">Brettin T</searchLink>; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Computing Environment and Life Sciences, Argonne National Laboratory, Argonne, IL 60439, United States.<br /><searchLink fieldCode="AU" term="%22Capria+A%22">Capria A</searchLink>; Department of Informatics, J. Craig Venter Institute, La Jolla, CA 92037, United States.<br /><searchLink fieldCode="AU" term="%22Chia+N%22">Chia N</searchLink>; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States.<br /><searchLink fieldCode="AU" term="%22Cucinell+C%22">Cucinell C</searchLink>; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States.<br /><searchLink fieldCode="AU" term="%22Davis+JJ%22">Davis JJ</searchLink>; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States.<br /><searchLink fieldCode="AU" term="%22Dempsey+DM%22">Dempsey DM</searchLink>; Department of Microbiology, University of Alabama at Birmingham, Birmingham, AL 35294, United States.<br /><searchLink fieldCode="AU" term="%22Dickerman+A%22">Dickerman A</searchLink>; Biocomplexity Institute, University of Virginia, Charlottesville, VA 22904, United States.<br /><searchLink fieldCode="AU" term="%22Dietrich+EM%22">Dietrich EM</searchLink>; Computing Environment and Life Sciences, Argonne National Laboratory, Argonne, IL 60439, United States.<br /><searchLink fieldCode="AU" term="%22Gokdemir+O%22">Gokdemir O</searchLink>; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States.; Department of Computer Science, University of Chicago, Chicago, IL 60637, United States.<br /><searchLink fieldCode="AU" term="%22Hendrickson+RC%22">Hendrickson RC</searchLink>; Department of Microbiology, University of Alabama at Birmingham, Birmingham, AL 35294, United States.<br /><searchLink fieldCode="AU" term="%22Kenyon+RW%22">Kenyon RW</searchLink>; Biocomplexity Institute, University of Virginia, Charlottesville, VA 22904, United States.<br /><searchLink fieldCode="AU" term="%22Klahn+B%22">Klahn B</searchLink>; Biocomplexity Institute, University of Virginia, Charlottesville, VA 22904, United States.<br /><searchLink fieldCode="AU" term="%22Kuscuoglu+M%22">Kuscuoglu M</searchLink>; Department of Informatics, J. Craig Venter Institute, La Jolla, CA 92037, United States.<br /><searchLink fieldCode="AU" term="%22Lefkowitz+EJ%22">Lefkowitz EJ</searchLink>; Department of Microbiology, University of Alabama at Birmingham, Birmingham, AL 35294, United States.<br /><searchLink fieldCode="AU" term="%22Ma+H%22">Ma H</searchLink>; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States.<br /><searchLink fieldCode="AU" term="%22Machi+D%22">Machi D</searchLink>; Biocomplexity Institute, University of Virginia, Charlottesville, VA 22904, United States.<br /><searchLink fieldCode="AU" term="%22Macken+C%22">Macken C</searchLink>; Department of Statistics, University of Auckland, Auckland 1010, New Zealand.<br /><searchLink fieldCode="AU" term="%22Mann+CM%22">Mann CM</searchLink>; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States.<br /><searchLink fieldCode="AU" term="%22Mao+C%22">Mao C</searchLink>; Biocomplexity Institute, University of Virginia, Charlottesville, VA 22904, United States.<br /><searchLink fieldCode="AU" term="%22Nguyen+M%22">Nguyen M</searchLink>; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States.<br /><searchLink fieldCode="AU" term="%22Olsen+GJ%22">Olsen GJ</searchLink>; Department of Microbiology, University of Illinois, Urbana, IL 61801, United States.<br /><searchLink fieldCode="AU" term="%22Olson+RD%22">Olson RD</searchLink>; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States.<br /><searchLink fieldCode="AU" term="%22Overbeek+R%22">Overbeek R</searchLink>; Fellowship for Interpretation of Genomes, Burr Ridge, IL 60527, United States.<br /><searchLink fieldCode="AU" term="%22Owens+SM%22">Owens SM</searchLink>; Biosciences Division, Argonne National Laboratory, Argonne, IL 60439, United States.<br /><searchLink fieldCode="AU" term="%22Parrello+B%22">Parrello B</searchLink>; Department of Computer Science, University of Chicago, Chicago, IL 60637, United States.<br /><searchLink fieldCode="AU" term="%22Poretsky+R%22">Poretsky R</searchLink>; Department of Biological Sciences, University of Illinois Chicago, Chicago, IL 60607, United States.<br /><searchLink fieldCode="AU" term="%22Pusch+GD%22">Pusch GD</searchLink>; Fellowship for Interpretation of Genomes, Burr Ridge, IL 60527, United States.<br /><searchLink fieldCode="AU" term="%22Ramanathan+A%22">Ramanathan A</searchLink>; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States.<br /><searchLink fieldCode="AU" term="%22Sheriff+JT%22">Sheriff JT</searchLink>; Department of Biological Sciences, University of Illinois Chicago, Chicago, IL 60607, United States.<br /><searchLink fieldCode="AU" term="%22Singh+I%22">Singh I</searchLink>; J. Craig Venter Institute, Rockville, MD 20850, United States.<br /><searchLink fieldCode="AU" term="%22Stewart+L%22">Stewart L</searchLink>; Department of Informatics, J. Craig Venter Institute, La Jolla, CA 92037, United States.<br /><searchLink fieldCode="AU" term="%22VanOeffelen+M%22">VanOeffelen M</searchLink>; Fellowship for Interpretation of Genomes, Burr Ridge, IL 60527, United States.<br /><searchLink fieldCode="AU" term="%22Vonstein+V%22">Vonstein V</searchLink>; Fellowship for Interpretation of Genomes, Burr Ridge, IL 60527, United States.<br /><searchLink fieldCode="AU" term="%22Warren+AS%22">Warren AS</searchLink>; Biocomplexity Institute, University of Virginia, Charlottesville, VA 22904, United States.<br /><searchLink fieldCode="AU" term="%22Wilke+A%22">Wilke A</searchLink>; Consortium for Advanced Science and Engineering, University of Chicago, Chicago, IL 60637, United States.; Division of Data Science and Learning, Argonne National Laboratory, Argonne, IL 60439, United States.<br /><searchLink fieldCode="AU" term="%22Zmasek+CM%22">Zmasek CM</searchLink>; Department of Informatics, J. Craig Venter Institute, La Jolla, CA 92037, United States.<br /><searchLink fieldCode="AU" term="%22Zuniga+A%22">Zuniga A</searchLink>; Department of Informatics, J. Craig Venter Institute, La Jolla, CA 92037, United States.<br /><searchLink fieldCode="AU" term="%22Stevens+RL%22">Stevens RL</searchLink>; Computing Environment and Life Sciences, Argonne National Laboratory, Argonne, IL 60439, United States.; Department of Computer Science, University of Chicago, Chicago, IL 60637, United States. – Name: TitleSource Label: Source Group: Src Data: <searchLink fieldCode="JN" term="%220411011%22">Nucleic acids research</searchLink> [Nucleic Acids Res] 2026 Jan 06; Vol. 54 (D1), pp. D715-D723. – Name: TypePub Label: Publication Type Group: TypPub Data: Journal Article – Name: TitleSource Label: Journal Info Group: Src Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Oxford+University+Press%22">Oxford University Press </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>0411011 <i>Publication Model: </i>Print <i>Cited Medium: </i>Internet <i>ISSN: </i>1362-4962 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2203051048%22">03051048 </searchLink><i>NLM ISO Abbreviation: </i>Nucleic Acids Res <i>Subsets: </i>MEDLINE |
| PLink | https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=41251138 |
| RecordInfo | BibRecord: BibEntity: Identifiers: – Type: doi Value: 10.1093/nar/gkaf1254 Languages: – Code: eng Text: English PhysicalDescription: Pagination: StartPage: D715 Titles: – TitleFull: BV-BRC: a unified bacterial and viral bioinformatics resource with expanded functionality and AI integration. Type: main BibRelationships: HasContributorRelationships: – PersonEntity: Name: NameFull: Shukla M – PersonEntity: Name: NameFull: Wattam AR – PersonEntity: Name: NameFull: Aleman A – PersonEntity: Name: NameFull: Bhattacharya R – PersonEntity: Name: NameFull: Bowers N – PersonEntity: Name: NameFull: Brettin T – PersonEntity: Name: NameFull: Capria A – PersonEntity: Name: NameFull: Chia N – PersonEntity: Name: NameFull: Cucinell C – PersonEntity: Name: NameFull: Davis JJ – PersonEntity: Name: NameFull: Dempsey DM – PersonEntity: Name: NameFull: Dickerman A – PersonEntity: Name: NameFull: Dietrich EM – PersonEntity: Name: NameFull: Gokdemir O – PersonEntity: Name: NameFull: Hendrickson RC – PersonEntity: Name: NameFull: Kenyon RW – PersonEntity: Name: NameFull: Klahn B – PersonEntity: Name: NameFull: Kuscuoglu M – PersonEntity: Name: NameFull: Lefkowitz EJ – PersonEntity: Name: NameFull: Ma H – PersonEntity: Name: NameFull: Machi D – PersonEntity: Name: NameFull: Macken C – PersonEntity: Name: NameFull: Mann CM – PersonEntity: Name: NameFull: Mao C – PersonEntity: Name: NameFull: Nguyen M – PersonEntity: Name: NameFull: Olsen GJ – PersonEntity: Name: NameFull: Olson RD – PersonEntity: Name: NameFull: Overbeek R – PersonEntity: Name: NameFull: Owens SM – PersonEntity: Name: NameFull: Parrello B – PersonEntity: Name: NameFull: Poretsky R – PersonEntity: Name: NameFull: Pusch GD – PersonEntity: Name: NameFull: Ramanathan A – PersonEntity: Name: NameFull: Sheriff JT – PersonEntity: Name: NameFull: Singh I – PersonEntity: Name: NameFull: Stewart L – PersonEntity: Name: NameFull: VanOeffelen M – PersonEntity: Name: NameFull: Vonstein V – PersonEntity: Name: NameFull: Warren AS – PersonEntity: Name: NameFull: Wilke A – PersonEntity: Name: NameFull: Zmasek CM – PersonEntity: Name: NameFull: Zuniga A – PersonEntity: Name: NameFull: Stevens RL IsPartOfRelationships: – BibEntity: Dates: – D: 06 M: 01 Text: 2026 Jan 06 Type: published Y: 2026 Identifiers: – Type: issn-electronic Value: 1362-4962 Numbering: – Type: volume Value: 54 – Type: issue Value: D1 Titles: – TitleFull: Nucleic acids research Type: main |
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