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Atomistic TCR-ligand interactions instruct memory T-cell differentiation.

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Title: Atomistic TCR-ligand interactions instruct memory T-cell differentiation.
Authors: Akitsu A; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medicine, Harvard Medical School; Boston; MA 02115, USA., Tan K; Structural Biology Center, X-Ray Science Division, Advanced Photon Source, Argonne National Laboratory; Lemont, IL 60439, USA., Mallis RJ; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medicine, Harvard Medical School; Boston; MA 02115, USA.; Department of Dermatology, Harvard Medical School; Boston, MA 02115, USA., Booker MA; Department of Informatics and Analytics, Dana-Farber Cancer Institute; Boston, MA 02115, USA., Duke-Cohan JS; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medicine, Harvard Medical School; Boston; MA 02115, USA., Brazin KN; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medicine, Harvard Medical School; Boston; MA 02115, USA., Kirkpatrick EH; Department of Chemical and Biomolecular Engineering, Vanderbilt University; Nashville, TN 37212, USA., Parkins AN; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medicine, Harvard Medical School; Boston; MA 02115, USA., Aryal S; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medicine, Harvard Medical School; Boston; MA 02115, USA., Cinella V; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA., Lee JJ; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA., Uberoy KI; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA., Koenig JK; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA., Biddle M; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA., Messier CM; Belfer Center for Applied Cancer Science, Dana-Farber Cancer Institute; Boston, MA, USA., Lizotte PH; Belfer Center for Applied Cancer Science, Dana-Farber Cancer Institute; Boston, MA, USA., Tolstorukov MY; Department of Informatics and Analytics, Dana-Farber Cancer Institute; Boston, MA 02115, USA., Hwang W; Departments of Biomedical Engineering, Materials Science & Engineering, Physics & Astronomy, Texas A&M University; College Station, TX 77843, USA.; Center for AI and Natural Sciences, Korea Institute for Advanced Study; Seoul 02455, Republic of Korea., Lang MJ; Department of Chemical and Biomolecular Engineering, Vanderbilt University; Nashville, TN 37212, USA.; Department of Molecular Physiology and Biophysics; Vanderbilt University School of Medicine; Nashville, TN 37232, USA., Reinherz EL; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medicine, Harvard Medical School; Boston; MA 02115, USA.
Source: BioRxiv : the preprint server for biology [bioRxiv] 2025 Nov 06. Date of Electronic Publication: 2025 Nov 06.
Publication Type: Journal Article; Preprint
Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE
Database: MEDLINE Ultimate
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DbLabel: MEDLINE Ultimate
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PubType: Academic Journal
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  Data: Atomistic TCR-ligand interactions instruct memory T-cell differentiation.
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  Data: <searchLink fieldCode="AU" term="%22Akitsu+A%22">Akitsu A</searchLink>; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medicine, Harvard Medical School; Boston; MA 02115, USA.<br /><searchLink fieldCode="AU" term="%22Tan+K%22">Tan K</searchLink>; Structural Biology Center, X-Ray Science Division, Advanced Photon Source, Argonne National Laboratory; Lemont, IL 60439, USA.<br /><searchLink fieldCode="AU" term="%22Mallis+RJ%22">Mallis RJ</searchLink>; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medicine, Harvard Medical School; Boston; MA 02115, USA.; Department of Dermatology, Harvard Medical School; Boston, MA 02115, USA.<br /><searchLink fieldCode="AU" term="%22Booker+MA%22">Booker MA</searchLink>; Department of Informatics and Analytics, Dana-Farber Cancer Institute; Boston, MA 02115, USA.<br /><searchLink fieldCode="AU" term="%22Duke-Cohan+JS%22">Duke-Cohan JS</searchLink>; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medicine, Harvard Medical School; Boston; MA 02115, USA.<br /><searchLink fieldCode="AU" term="%22Brazin+KN%22">Brazin KN</searchLink>; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medicine, Harvard Medical School; Boston; MA 02115, USA.<br /><searchLink fieldCode="AU" term="%22Kirkpatrick+EH%22">Kirkpatrick EH</searchLink>; Department of Chemical and Biomolecular Engineering, Vanderbilt University; Nashville, TN 37212, USA.<br /><searchLink fieldCode="AU" term="%22Parkins+AN%22">Parkins AN</searchLink>; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medicine, Harvard Medical School; Boston; MA 02115, USA.<br /><searchLink fieldCode="AU" term="%22Aryal+S%22">Aryal S</searchLink>; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medicine, Harvard Medical School; Boston; MA 02115, USA.<br /><searchLink fieldCode="AU" term="%22Cinella+V%22">Cinella V</searchLink>; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.<br /><searchLink fieldCode="AU" term="%22Lee+JJ%22">Lee JJ</searchLink>; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.<br /><searchLink fieldCode="AU" term="%22Uberoy+KI%22">Uberoy KI</searchLink>; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.<br /><searchLink fieldCode="AU" term="%22Koenig+JK%22">Koenig JK</searchLink>; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.<br /><searchLink fieldCode="AU" term="%22Biddle+M%22">Biddle M</searchLink>; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.<br /><searchLink fieldCode="AU" term="%22Messier+CM%22">Messier CM</searchLink>; Belfer Center for Applied Cancer Science, Dana-Farber Cancer Institute; Boston, MA, USA.<br /><searchLink fieldCode="AU" term="%22Lizotte+PH%22">Lizotte PH</searchLink>; Belfer Center for Applied Cancer Science, Dana-Farber Cancer Institute; Boston, MA, USA.<br /><searchLink fieldCode="AU" term="%22Tolstorukov+MY%22">Tolstorukov MY</searchLink>; Department of Informatics and Analytics, Dana-Farber Cancer Institute; Boston, MA 02115, USA.<br /><searchLink fieldCode="AU" term="%22Hwang+W%22">Hwang W</searchLink>; Departments of Biomedical Engineering, Materials Science & Engineering, Physics & Astronomy, Texas A&M University; College Station, TX 77843, USA.; Center for AI and Natural Sciences, Korea Institute for Advanced Study; Seoul 02455, Republic of Korea.<br /><searchLink fieldCode="AU" term="%22Lang+MJ%22">Lang MJ</searchLink>; Department of Chemical and Biomolecular Engineering, Vanderbilt University; Nashville, TN 37212, USA.; Department of Molecular Physiology and Biophysics; Vanderbilt University School of Medicine; Nashville, TN 37232, USA.<br /><searchLink fieldCode="AU" term="%22Reinherz+EL%22">Reinherz EL</searchLink>; Laboratory of Immunobiology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medical Oncology, Dana-Farber Cancer Institute; Boston, MA 02115, USA.; Department of Medicine, Harvard Medical School; 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        Value: 10.1101/2025.11.05.686789
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