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Predicting dynamic expression patterns in budding yeast with a fungal DNA language model.

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Title: Predicting dynamic expression patterns in budding yeast with a fungal DNA language model.
Authors: Chao KH; Department of Computer Science, Johns Hopkins University, Baltimore, MD 21218, USA.; Center for Computational Biology, Johns Hopkins University, Baltimore, MD 21218, USA., Magzoub MM; Calico Life Sciences LLC, South San Francisco, CA 94080, USA., Stoops E; Calico Life Sciences LLC, South San Francisco, CA 94080, USA., Hackett S; Calico Life Sciences LLC, South San Francisco, CA 94080, USA., Linder J; Calico Life Sciences LLC, South San Francisco, CA 94080, USA., Kelley DR; Calico Life Sciences LLC, South San Francisco, CA 94080, USA.
Source: Research square [Res Sq] 2025 Oct 14. Date of Electronic Publication: 2025 Oct 14.
Publication Type: Journal Article; Preprint
Journal Info: Country of Publication: United States NLM ID: 101768035 Publication Model: Electronic Cited Medium: Internet ISSN: 2693-5015 (Electronic) Linking ISSN: 26935015 NLM ISO Abbreviation: Res Sq Subsets: PubMed not MEDLINE
Database: MEDLINE Ultimate
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An: 41282136
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PubType: Academic Journal
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  Data: <searchLink fieldCode="AU" term="%22Chao+KH%22">Chao KH</searchLink>; Department of Computer Science, Johns Hopkins University, Baltimore, MD 21218, USA.; Center for Computational Biology, Johns Hopkins University, Baltimore, MD 21218, USA.<br /><searchLink fieldCode="AU" term="%22Magzoub+MM%22">Magzoub MM</searchLink>; Calico Life Sciences LLC, South San Francisco, CA 94080, USA.<br /><searchLink fieldCode="AU" term="%22Stoops+E%22">Stoops E</searchLink>; Calico Life Sciences LLC, South San Francisco, CA 94080, USA.<br /><searchLink fieldCode="AU" term="%22Hackett+S%22">Hackett S</searchLink>; Calico Life Sciences LLC, South San Francisco, CA 94080, USA.<br /><searchLink fieldCode="AU" term="%22Linder+J%22">Linder J</searchLink>; Calico Life Sciences LLC, South San Francisco, CA 94080, USA.<br /><searchLink fieldCode="AU" term="%22Kelley+DR%22">Kelley DR</searchLink>; Calico Life Sciences LLC, South San Francisco, CA 94080, USA.
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  Data: <searchLink fieldCode="JN" term="%22101768035%22">Research square</searchLink> [Res Sq] 2025 Oct 14. <i>Date of Electronic Publication: </i>2025 Oct 14.
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  Data: <i>Country of Publication: </i>United States <i>NLM ID: </i>101768035 <i>Publication Model: </i>Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>2693-5015 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2226935015%22">26935015 </searchLink><i>NLM ISO Abbreviation: </i>Res Sq <i>Subsets: </i>PubMed not MEDLINE
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        Value: 10.21203/rs.3.rs-7681940/v1
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        Text: English
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      – TitleFull: Predicting dynamic expression patterns in budding yeast with a fungal DNA language model.
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              Text: 2025 Oct 14
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