Standardizing microbiome research: interlaboratory validation of SOPs for sample preparation and DNA extraction from food and environmental ecosystems.
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| Title: | Standardizing microbiome research: interlaboratory validation of SOPs for sample preparation and DNA extraction from food and environmental ecosystems. |
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| Authors: | Ferrocino I; Department of Agricultural, Forest and Food Sciences - DISAFA, University of Torino, Torino, Italy., Ferrara M; Institute of Sciences of Food Production (ISPA), National Research Council (CNR), Bari, Italy., Garello M; Department of Agricultural, Forest and Food Sciences - DISAFA, University of Torino, Torino, Italy., Turchetti B; Department of Agricultural, Food and Environmental Sciences and Industrial Yeasts Collection DBVPG, University of Perugia, Perugia, Italy., Andreolli M; Department of Biotechnology & VUCC-DBT Verona University Culture Collection, University of Verona, Verona, Italy., Arena MP; Department of Life Sciences, University of Modena and Reggio Emilia, Reggio Emilia, Italy., Alduina R; Department of Biological, Chemical and Pharmaceutical Sciences and Technologies, University of Palermo, Palermo, Italy., Aloi F; Department of Agricultural, Forest and Food Sciences - DISAFA, University of Torino, Torino, Italy., Bevivino A; Department for Sustainability, ENEA, Italian National Agency for New Technologies, Energy and Sustainable Economic Development, Casaccia Research Center, Roma, Italy., Bruno E; Department of Earth and Environmental Sciences (DISAT), University of Milano-Bicocca, Milano, Italy., Capozzi V; Institute of Sciences of Food Production (ISPA), National Research Council (CNR), Bari, Italy., Coronas R; Department of Agricultural Sciences, University of Sassari, Sassari, Italy., De Vero L; Institute of Sciences of Food Production (ISPA), National Research Council (CNR), Bari, Italy., Di Renzo T; Institute of Food Sciences, National Research Council (CNR), Avellino, Italy., Franzetti A; Department of Earth and Environmental Sciences (DISAT), University of Milano-Bicocca, Milano, Italy., Gaglio R; Department of Agricultural, Food and Forest Sciences (SAAF), University of Palermo, Palermo, Italy., Gallo G; Department of Biological, Chemical and Pharmaceutical Sciences and Technologies, University of Palermo, Palermo, Italy., Gullo M; Department of Life Sciences, University of Modena and Reggio Emilia, Reggio Emilia, Italy., Guarcello R; Department of Agricultural, Food and Forest Sciences (SAAF), University of Palermo, Palermo, Italy., Giavalisco M; Department of Agricultural, Forestry, Food and Environmental Sciences - DAFE, University of Basilicata, Potenza, Italy., Lampis S; Department of Biotechnology & VUCC-DBT Verona University Culture Collection, University of Verona, Verona, Italy., Mugnai G; Department of Agronomy, Food, Natural Resources, Animals and Environment, University of Padova, Padova, Italy., Quatrini P; Department of Earth and Marine Sciences, University of Palermo, Palermo, Italy., Reale A; Institute of Food Sciences, National Research Council (CNR), Avellino, Italy., Sbarra F; Department for Sustainability, ENEA, Italian National Agency for New Technologies, Energy and Sustainable Economic Development, Casaccia Research Center, Roma, Italy.; Department of Life Sciences and System Biology, University of Torino, Torino, Italy., Sannino C; Department of Agricultural, Food and Environmental Sciences and Industrial Yeasts Collection DBVPG, University of Perugia, Perugia, Italy., Spadaro D; Department of Agricultural, Forest and Food Sciences - DISAFA, University of Torino, Torino, Italy., Tatangelo V; Department of Earth and Environmental Sciences (DISAT), University of Milano-Bicocca, Milano, Italy., Visca A; Department for Sustainability, ENEA, Italian National Agency for New Technologies, Energy and Sustainable Economic Development, Casaccia Research Center, Roma, Italy., Zara G; Department of Agricultural Sciences, University of Sassari, Sassari, Italy., Zotta T; Department of Agricultural, Forestry, Food and Environmental Sciences - DAFE, University of Basilicata, Potenza, Italy., Varese GC; Department of Life Sciences and System Biology, University of Torino, Torino, Italy., Cocolin L; Department of Agricultural, Forest and Food Sciences - DISAFA, University of Torino, Torino, Italy. lucasimone.cocolin@unito.it. |
| Source: | Environmental microbiome [Environ Microbiome] 2025 Dec 12; Vol. 21 (1), pp. 14. Date of Electronic Publication: 2025 Dec 12. |
| Publication Type: | Journal Article |
| Journal Info: | Publisher: BMC Country of Publication: England NLM ID: 101768168 Publication Model: Electronic Cited Medium: Internet ISSN: 2524-6372 (Electronic) Linking ISSN: 25246372 NLM ISO Abbreviation: Environ Microbiome Subsets: PubMed not MEDLINE |
| Database: | MEDLINE Ultimate |
| FullText | Text: Availability: 0 |
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| Header | DbId: mdl DbLabel: MEDLINE Ultimate An: 41388332 AccessLevel: 2 PubType: Academic Journal PubTypeId: academicJournal PreciseRelevancyScore: 0 |
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| Items | – Name: Title Label: Title Group: Ti Data: Standardizing microbiome research: interlaboratory validation of SOPs for sample preparation and DNA extraction from food and environmental ecosystems. – Name: Author Label: Authors Group: Au Data: <searchLink fieldCode="AU" term="%22Ferrocino+I%22">Ferrocino I</searchLink>; Department of Agricultural, Forest and Food Sciences - DISAFA, University of Torino, Torino, Italy.<br /><searchLink fieldCode="AU" term="%22Ferrara+M%22">Ferrara M</searchLink>; Institute of Sciences of Food Production (ISPA), National Research Council (CNR), Bari, Italy.<br /><searchLink fieldCode="AU" term="%22Garello+M%22">Garello M</searchLink>; Department of Agricultural, Forest and Food Sciences - DISAFA, University of Torino, Torino, Italy.<br /><searchLink fieldCode="AU" term="%22Turchetti+B%22">Turchetti B</searchLink>; Department of Agricultural, Food and Environmental Sciences and Industrial Yeasts Collection DBVPG, University of Perugia, Perugia, Italy.<br /><searchLink fieldCode="AU" term="%22Andreolli+M%22">Andreolli M</searchLink>; Department of Biotechnology & VUCC-DBT Verona University Culture Collection, University of Verona, Verona, Italy.<br /><searchLink fieldCode="AU" term="%22Arena+MP%22">Arena MP</searchLink>; Department of Life Sciences, University of Modena and Reggio Emilia, Reggio Emilia, Italy.<br /><searchLink fieldCode="AU" term="%22Alduina+R%22">Alduina R</searchLink>; Department of Biological, Chemical and Pharmaceutical Sciences and Technologies, University of Palermo, Palermo, Italy.<br /><searchLink fieldCode="AU" term="%22Aloi+F%22">Aloi F</searchLink>; Department of Agricultural, Forest and Food Sciences - DISAFA, University of Torino, Torino, Italy.<br /><searchLink fieldCode="AU" term="%22Bevivino+A%22">Bevivino A</searchLink>; Department for Sustainability, ENEA, Italian National Agency for New Technologies, Energy and Sustainable Economic Development, Casaccia Research Center, Roma, Italy.<br /><searchLink fieldCode="AU" term="%22Bruno+E%22">Bruno E</searchLink>; Department of Earth and Environmental Sciences (DISAT), University of Milano-Bicocca, Milano, Italy.<br /><searchLink fieldCode="AU" term="%22Capozzi+V%22">Capozzi V</searchLink>; Institute of Sciences of Food Production (ISPA), National Research Council (CNR), Bari, Italy.<br /><searchLink fieldCode="AU" term="%22Coronas+R%22">Coronas R</searchLink>; Department of Agricultural Sciences, University of Sassari, Sassari, Italy.<br /><searchLink fieldCode="AU" term="%22De+Vero+L%22">De Vero L</searchLink>; Institute of Sciences of Food Production (ISPA), National Research Council (CNR), Bari, Italy.<br /><searchLink fieldCode="AU" term="%22Di+Renzo+T%22">Di Renzo T</searchLink>; Institute of Food Sciences, National Research Council (CNR), Avellino, Italy.<br /><searchLink fieldCode="AU" term="%22Franzetti+A%22">Franzetti A</searchLink>; Department of Earth and Environmental Sciences (DISAT), University of Milano-Bicocca, Milano, Italy.<br /><searchLink fieldCode="AU" term="%22Gaglio+R%22">Gaglio R</searchLink>; Department of Agricultural, Food and Forest Sciences (SAAF), University of Palermo, Palermo, Italy.<br /><searchLink fieldCode="AU" term="%22Gallo+G%22">Gallo G</searchLink>; Department of Biological, Chemical and Pharmaceutical Sciences and Technologies, University of Palermo, Palermo, Italy.<br /><searchLink fieldCode="AU" term="%22Gullo+M%22">Gullo M</searchLink>; Department of Life Sciences, University of Modena and Reggio Emilia, Reggio Emilia, Italy.<br /><searchLink fieldCode="AU" term="%22Guarcello+R%22">Guarcello R</searchLink>; Department of Agricultural, Food and Forest Sciences (SAAF), University of Palermo, Palermo, Italy.<br /><searchLink fieldCode="AU" term="%22Giavalisco+M%22">Giavalisco M</searchLink>; Department of Agricultural, Forestry, Food and Environmental Sciences - DAFE, University of Basilicata, Potenza, Italy.<br /><searchLink fieldCode="AU" term="%22Lampis+S%22">Lampis S</searchLink>; Department of Biotechnology & VUCC-DBT Verona University Culture Collection, University of Verona, Verona, Italy.<br /><searchLink fieldCode="AU" term="%22Mugnai+G%22">Mugnai G</searchLink>; Department of Agronomy, Food, Natural Resources, Animals and Environment, University of Padova, Padova, Italy.<br /><searchLink fieldCode="AU" term="%22Quatrini+P%22">Quatrini P</searchLink>; Department of Earth and Marine Sciences, University of Palermo, Palermo, Italy.<br /><searchLink fieldCode="AU" term="%22Reale+A%22">Reale A</searchLink>; Institute of Food Sciences, National Research Council (CNR), Avellino, Italy.<br /><searchLink fieldCode="AU" term="%22Sbarra+F%22">Sbarra F</searchLink>; Department for Sustainability, ENEA, Italian National Agency for New Technologies, Energy and Sustainable Economic Development, Casaccia Research Center, Roma, Italy.; Department of Life Sciences and System Biology, University of Torino, Torino, Italy.<br /><searchLink fieldCode="AU" term="%22Sannino+C%22">Sannino C</searchLink>; Department of Agricultural, Food and Environmental Sciences and Industrial Yeasts Collection DBVPG, University of Perugia, Perugia, Italy.<br /><searchLink fieldCode="AU" term="%22Spadaro+D%22">Spadaro D</searchLink>; Department of Agricultural, Forest and Food Sciences - DISAFA, University of Torino, Torino, Italy.<br /><searchLink fieldCode="AU" term="%22Tatangelo+V%22">Tatangelo V</searchLink>; Department of Earth and Environmental Sciences (DISAT), University of Milano-Bicocca, Milano, Italy.<br /><searchLink fieldCode="AU" term="%22Visca+A%22">Visca A</searchLink>; Department for Sustainability, ENEA, Italian National Agency for New Technologies, Energy and Sustainable Economic Development, Casaccia Research Center, Roma, Italy.<br /><searchLink fieldCode="AU" term="%22Zara+G%22">Zara G</searchLink>; Department of Agricultural Sciences, University of Sassari, Sassari, Italy.<br /><searchLink fieldCode="AU" term="%22Zotta+T%22">Zotta T</searchLink>; Department of Agricultural, Forestry, Food and Environmental Sciences - DAFE, University of Basilicata, Potenza, Italy.<br /><searchLink fieldCode="AU" term="%22Varese+GC%22">Varese GC</searchLink>; Department of Life Sciences and System Biology, University of Torino, Torino, Italy.<br /><searchLink fieldCode="AU" term="%22Cocolin+L%22">Cocolin L</searchLink>; Department of Agricultural, Forest and Food Sciences - DISAFA, University of Torino, Torino, Italy. lucasimone.cocolin@unito.it. – Name: TitleSource Label: Source Group: Src Data: <searchLink fieldCode="JN" term="%22101768168%22">Environmental microbiome</searchLink> [Environ Microbiome] 2025 Dec 12; Vol. 21 (1), pp. 14. <i>Date of Electronic Publication: </i>2025 Dec 12. – Name: TypePub Label: Publication Type Group: TypPub Data: Journal Article – Name: TitleSource Label: Journal Info Group: Src Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22BMC%22">BMC </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>101768168 <i>Publication Model: </i>Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>2524-6372 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2225246372%22">25246372 </searchLink><i>NLM ISO Abbreviation: </i>Environ Microbiome <i>Subsets: </i>PubMed not MEDLINE |
| PLink | https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=41388332 |
| RecordInfo | BibRecord: BibEntity: Identifiers: – Type: doi Value: 10.1186/s40793-025-00833-z Languages: – Code: eng Text: English PhysicalDescription: Pagination: StartPage: 14 Titles: – TitleFull: Standardizing microbiome research: interlaboratory validation of SOPs for sample preparation and DNA extraction from food and environmental ecosystems. Type: main BibRelationships: HasContributorRelationships: – PersonEntity: Name: NameFull: Ferrocino I – PersonEntity: Name: NameFull: Ferrara M – PersonEntity: Name: NameFull: Garello M – PersonEntity: Name: NameFull: Turchetti B – PersonEntity: Name: NameFull: Andreolli M – PersonEntity: Name: NameFull: Arena MP – PersonEntity: Name: NameFull: Alduina R – PersonEntity: Name: NameFull: Aloi F – PersonEntity: Name: NameFull: Bevivino A – PersonEntity: Name: NameFull: Bruno E – PersonEntity: Name: NameFull: Capozzi V – PersonEntity: Name: NameFull: Coronas R – PersonEntity: Name: NameFull: De Vero L – PersonEntity: Name: NameFull: Di Renzo T – PersonEntity: Name: NameFull: Franzetti A – PersonEntity: Name: NameFull: Gaglio R – PersonEntity: Name: NameFull: Gallo G – PersonEntity: Name: NameFull: Gullo M – PersonEntity: Name: NameFull: Guarcello R – PersonEntity: Name: NameFull: Giavalisco M – PersonEntity: Name: NameFull: Lampis S – PersonEntity: Name: NameFull: Mugnai G – PersonEntity: Name: NameFull: Quatrini P – PersonEntity: Name: NameFull: Reale A – PersonEntity: Name: NameFull: Sbarra F – PersonEntity: Name: NameFull: Sannino C – PersonEntity: Name: NameFull: Spadaro D – PersonEntity: Name: NameFull: Tatangelo V – PersonEntity: Name: NameFull: Visca A – PersonEntity: Name: NameFull: Zara G – PersonEntity: Name: NameFull: Zotta T – PersonEntity: Name: NameFull: Varese GC – PersonEntity: Name: NameFull: Cocolin L IsPartOfRelationships: – BibEntity: Dates: – D: 12 M: 12 Text: 2025 Dec 12 Type: published Y: 2025 Identifiers: – Type: issn-electronic Value: 2524-6372 Numbering: – Type: volume Value: 21 – Type: issue Value: 1 Titles: – TitleFull: Environmental microbiome Type: main |
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