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Case-control and genomic epidemiology characterization of SARS-CoV-2 breakthrough infections during the Delta-to-Omicron transition.

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Title: Case-control and genomic epidemiology characterization of SARS-CoV-2 breakthrough infections during the Delta-to-Omicron transition.
Authors: Yuan E; Harvard University, Cambridge, Massachusetts, USA., Hansen CL; Division of International Epidemiology and Population Studies, Fogarty International Center, National Institutes of Health, Bethesda, Maryland, USA.; PandemiX Center of Excellence, Roskilde University, Roskilde, Denmark., Tamim S; National Institute of Health, Islamabad, Pakistan., Kanwar S; Department of Paediatrics and Child Health, The Aga Khan University, Karachi, Pakistan., Spiro DJ; Division of International Epidemiology and Population Studies, Fogarty International Center, National Institutes of Health, Bethesda, Maryland, USA., Gonzalez-Losa R; Laboratorio de Virología, CIR-Biomédicas, Universidad Autónoma Yucatán, Mérida, México., Conde-Ferraez L; Laboratorio de Virología, CIR-Biomédicas, Universidad Autónoma Yucatán, Mérida, México., Granja-Pérez P; Laboratorio Estatal de Salud Pública, Servicios de Salud de Yucatán, Mérida, México., Villanueva-Jorge S; Laboratorio Estatal de Salud Pública, Servicios de Salud de Yucatán, Mérida, México., López-Martínez I; Instituto de Diagnóstico y Referencia Epidemiológicos, Dirección General de Epidemiología, Mexico City, Mexico., Barrea-Badillo G; Instituto de Diagnóstico y Referencia Epidemiológicos, Dirección General de Epidemiología, Mexico City, Mexico., Corvelo A; New York Genome Center, New York, New York, USA., Fennessey S; New York Genome Center, New York, New York, USA., Zody MC; New York Genome Center, New York, New York, USA., Ayora-Talavera G; Laboratorio de Virología, CIR-Biomédicas, Universidad Autónoma Yucatán, Mérida, México., Trovao NS; Division of International Epidemiology and Population Studies, Fogarty International Center, National Institutes of Health, Bethesda, Maryland, USA.
Source: MBio [mBio] 2026 Feb 11; Vol. 17 (2), pp. e0243225. Date of Electronic Publication: 2026 Jan 08.
Publication Type: Journal Article; Research Support, Non-U.S. Gov't
Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101519231 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2150-7511 (Electronic) NLM ISO Abbreviation: mBio Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Case-control and genomic epidemiology characterization of SARS-CoV-2 breakthrough infections during the Delta-to-Omicron transition.
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  Data: <searchLink fieldCode="AU" term="%22Yuan+E%22">Yuan E</searchLink>; Harvard University, Cambridge, Massachusetts, USA.<br /><searchLink fieldCode="AU" term="%22Hansen+CL%22">Hansen CL</searchLink>; Division of International Epidemiology and Population Studies, Fogarty International Center, National Institutes of Health, Bethesda, Maryland, USA.; PandemiX Center of Excellence, Roskilde University, Roskilde, Denmark.<br /><searchLink fieldCode="AU" term="%22Tamim+S%22">Tamim S</searchLink>; National Institute of Health, Islamabad, Pakistan.<br /><searchLink fieldCode="AU" term="%22Kanwar+S%22">Kanwar S</searchLink>; Department of Paediatrics and Child Health, The Aga Khan University, Karachi, Pakistan.<br /><searchLink fieldCode="AU" term="%22Spiro+DJ%22">Spiro DJ</searchLink>; Division of International Epidemiology and Population Studies, Fogarty International Center, National Institutes of Health, Bethesda, Maryland, USA.<br /><searchLink fieldCode="AU" term="%22Gonzalez-Losa+R%22">Gonzalez-Losa R</searchLink>; Laboratorio de Virología, CIR-Biomédicas, Universidad Autónoma Yucatán, Mérida, México.<br /><searchLink fieldCode="AU" term="%22Conde-Ferraez+L%22">Conde-Ferraez L</searchLink>; Laboratorio de Virología, CIR-Biomédicas, Universidad Autónoma Yucatán, Mérida, México.<br /><searchLink fieldCode="AU" term="%22Granja-Pérez+P%22">Granja-Pérez P</searchLink>; Laboratorio Estatal de Salud Pública, Servicios de Salud de Yucatán, Mérida, México.<br /><searchLink fieldCode="AU" term="%22Villanueva-Jorge+S%22">Villanueva-Jorge S</searchLink>; Laboratorio Estatal de Salud Pública, Servicios de Salud de Yucatán, Mérida, México.<br /><searchLink fieldCode="AU" term="%22López-Martínez+I%22">López-Martínez I</searchLink>; Instituto de Diagnóstico y Referencia Epidemiológicos, Dirección General de Epidemiología, Mexico City, Mexico.<br /><searchLink fieldCode="AU" term="%22Barrea-Badillo+G%22">Barrea-Badillo G</searchLink>; Instituto de Diagnóstico y Referencia Epidemiológicos, Dirección General de Epidemiología, Mexico City, Mexico.<br /><searchLink fieldCode="AU" term="%22Corvelo+A%22">Corvelo A</searchLink>; New York Genome Center, New York, New York, USA.<br /><searchLink fieldCode="AU" term="%22Fennessey+S%22">Fennessey S</searchLink>; New York Genome Center, New York, New York, USA.<br /><searchLink fieldCode="AU" term="%22Zody+MC%22">Zody MC</searchLink>; New York Genome Center, New York, New York, USA.<br /><searchLink fieldCode="AU" term="%22Ayora-Talavera+G%22">Ayora-Talavera G</searchLink>; Laboratorio de Virología, CIR-Biomédicas, Universidad Autónoma Yucatán, Mérida, México.<br /><searchLink fieldCode="AU" term="%22Trovao+NS%22">Trovao NS</searchLink>; Division of International Epidemiology and Population Studies, Fogarty International Center, National Institutes of Health, Bethesda, Maryland, USA.
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  Data: <searchLink fieldCode="JN" term="%22101519231%22">MBio</searchLink> [mBio] 2026 Feb 11; Vol. 17 (2), pp. e0243225. <i>Date of Electronic Publication: </i>2026 Jan 08.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22American+Society+for+Microbiology%22">American Society for Microbiology </searchLink><i>Country of Publication: </i>United States <i>NLM ID: </i>101519231 <i>Publication Model: </i>Print-Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>2150-7511 (Electronic) <i>NLM ISO Abbreviation: </i>mBio <i>Subsets: </i>MEDLINE
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