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Transmission lineage dynamics and the detection of viral importation in emerging epidemics.

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Title: Transmission lineage dynamics and the detection of viral importation in emerging epidemics.
Authors: Tsui JL; Department of Biology, University of Oxford, Oxford, United Kingdom; Pandemic Sciences Institute, University of Oxford, Oxford, United Kingdom. Electronic address: lok.tsui@new.ox.ac.uk., Sambaturu P; Department of Biology, University of Oxford, Oxford, United Kingdom; Pandemic Sciences Institute, University of Oxford, Oxford, United Kingdom; Department of Computer Science, University of Oxford, Oxford, United Kingdom., Pena RE; Department of Biology, University of Oxford, Oxford, United Kingdom; Pandemic Sciences Institute, University of Oxford, Oxford, United Kingdom., Too L; Independent Researcher., Gutierrez B; Department of Biology, University of Oxford, Oxford, United Kingdom; Pandemic Sciences Institute, University of Oxford, Oxford, United Kingdom; Colegio de Ciencias Biologicas y Ambientales; Universidad San Francisco de Quito USFQ, Quito, Ecuador., Inward R; Department of Biology, University of Oxford, Oxford, United Kingdom; Pandemic Sciences Institute, University of Oxford, Oxford, United Kingdom., Kraemer MUG; Department of Biology, University of Oxford, Oxford, United Kingdom; Pandemic Sciences Institute, University of Oxford, Oxford, United Kingdom., du Plessis L; Department of Biosystems; Science and Engineering, ETH Zürich, Basel, Switzerland; Swiss Institute of Bioinformatics; Lausanne, Switzerland., Pybus OG; Department of Biology, University of Oxford, Oxford, United Kingdom; Pandemic Sciences Institute, University of Oxford, Oxford, United Kingdom; Department of Pathobiology and Population Sciences, Royal Veterinary College, London, United Kingdom. Electronic address: oliver.pybus@biology.ox.ac.uk.
Source: Epidemics [Epidemics] 2026 Mar; Vol. 54, pp. 100893. Date of Electronic Publication: 2026 Feb 19.
Publication Type: Journal Article
Journal Info: Publisher: Elsevier Country of Publication: Netherlands NLM ID: 101484711 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1878-0067 (Electronic) Linking ISSN: 18780067 NLM ISO Abbreviation: Epidemics Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Transmission lineage dynamics and the detection of viral importation in emerging epidemics.
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  Data: <searchLink fieldCode="AU" term="%22Tsui+JL%22">Tsui JL</searchLink>; Department of Biology, University of Oxford, Oxford, United Kingdom; Pandemic Sciences Institute, University of Oxford, Oxford, United Kingdom. Electronic address: lok.tsui@new.ox.ac.uk.<br /><searchLink fieldCode="AU" term="%22Sambaturu+P%22">Sambaturu P</searchLink>; Department of Biology, University of Oxford, Oxford, United Kingdom; Pandemic Sciences Institute, University of Oxford, Oxford, United Kingdom; Department of Computer Science, University of Oxford, Oxford, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Pena+RE%22">Pena RE</searchLink>; Department of Biology, University of Oxford, Oxford, United Kingdom; Pandemic Sciences Institute, University of Oxford, Oxford, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Too+L%22">Too L</searchLink>; Independent Researcher.<br /><searchLink fieldCode="AU" term="%22Gutierrez+B%22">Gutierrez B</searchLink>; Department of Biology, University of Oxford, Oxford, United Kingdom; Pandemic Sciences Institute, University of Oxford, Oxford, United Kingdom; Colegio de Ciencias Biologicas y Ambientales; Universidad San Francisco de Quito USFQ, Quito, Ecuador.<br /><searchLink fieldCode="AU" term="%22Inward+R%22">Inward R</searchLink>; Department of Biology, University of Oxford, Oxford, United Kingdom; Pandemic Sciences Institute, University of Oxford, Oxford, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Kraemer+MUG%22">Kraemer MUG</searchLink>; Department of Biology, University of Oxford, Oxford, United Kingdom; Pandemic Sciences Institute, University of Oxford, Oxford, United Kingdom.<br /><searchLink fieldCode="AU" term="%22du+Plessis+L%22">du Plessis L</searchLink>; Department of Biosystems; Science and Engineering, ETH Zürich, Basel, Switzerland; Swiss Institute of Bioinformatics; Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Pybus+OG%22">Pybus OG</searchLink>; Department of Biology, University of Oxford, Oxford, United Kingdom; Pandemic Sciences Institute, University of Oxford, Oxford, United Kingdom; Department of Pathobiology and Population Sciences, Royal Veterinary College, London, United Kingdom. Electronic address: oliver.pybus@biology.ox.ac.uk.
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