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Assembly of a pangenome uncovers novel non-reference unique insertion sequences in cattle highlighting their genetic diversity.

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Title: Assembly of a pangenome uncovers novel non-reference unique insertion sequences in cattle highlighting their genetic diversity.
Authors: Sorin V; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France. valentin.sorin@inrae.fr., Besnard F; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France.; Eliance, 149 Rue de Bercy, 75012, Paris, France., Capitan A; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France., Grohs C; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France., Naji MM; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France., Escouflaire C; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France.; Eliance, 149 Rue de Bercy, 75012, Paris, France., Fritz S; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France.; Eliance, 149 Rue de Bercy, 75012, Paris, France., Lledo J; INRAE, GeT-PlaGeGenotoul, 31326, Castanet-Tolosan, France., Eché C; INRAE, GeT-PlaGeGenotoul, 31326, Castanet-Tolosan, France., Iampietro C; INRAE, GeT-PlaGeGenotoul, 31326, Castanet-Tolosan, France., Donnadieu C; INRAE, GeT-PlaGeGenotoul, 31326, Castanet-Tolosan, France., Milan D; INRAE, GeT-PlaGeGenotoul, 31326, Castanet-Tolosan, France.; GenPhySE, Université de Toulouse, INRAE, ENVT, 31326, Castanet-Tolosan, France., Drouilhet L; GenPhySE, Université de Toulouse, INRAE, ENVT, 31326, Castanet-Tolosan, France., Tosser-Klopp G; GenPhySE, Université de Toulouse, INRAE, ENVT, 31326, Castanet-Tolosan, France., Boichard D; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France., Klopp C; Genotoul BioinfoBioInfoMics, MIAT UR875, Sigenae, INRAE, 31326, Castanet-Tolosan, France., Sanchez MP; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France., Boussaha M; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France. mekki.boussaha@inrae.fr.
Source: Journal of animal science and biotechnology [J Anim Sci Biotechnol] 2026 Mar 09; Vol. 17 (1). Date of Electronic Publication: 2026 Mar 09.
Publication Type: Journal Article
Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101581293 Publication Model: Electronic Cited Medium: Print ISSN: 1674-9782 (Print) Linking ISSN: 16749782 NLM ISO Abbreviation: J Anim Sci Biotechnol Subsets: PubMed not MEDLINE
Database: MEDLINE Ultimate
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  Data: Assembly of a pangenome uncovers novel non-reference unique insertion sequences in cattle highlighting their genetic diversity.
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  Data: <searchLink fieldCode="AU" term="%22Sorin+V%22">Sorin V</searchLink>; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France. valentin.sorin@inrae.fr.<br /><searchLink fieldCode="AU" term="%22Besnard+F%22">Besnard F</searchLink>; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France.; Eliance, 149 Rue de Bercy, 75012, Paris, France.<br /><searchLink fieldCode="AU" term="%22Capitan+A%22">Capitan A</searchLink>; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France.<br /><searchLink fieldCode="AU" term="%22Grohs+C%22">Grohs C</searchLink>; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France.<br /><searchLink fieldCode="AU" term="%22Naji+MM%22">Naji MM</searchLink>; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France.<br /><searchLink fieldCode="AU" term="%22Escouflaire+C%22">Escouflaire C</searchLink>; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France.; Eliance, 149 Rue de Bercy, 75012, Paris, France.<br /><searchLink fieldCode="AU" term="%22Fritz+S%22">Fritz S</searchLink>; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France.; Eliance, 149 Rue de Bercy, 75012, Paris, France.<br /><searchLink fieldCode="AU" term="%22Lledo+J%22">Lledo J</searchLink>; INRAE, GeT-PlaGeGenotoul, 31326, Castanet-Tolosan, France.<br /><searchLink fieldCode="AU" term="%22Eché+C%22">Eché C</searchLink>; INRAE, GeT-PlaGeGenotoul, 31326, Castanet-Tolosan, France.<br /><searchLink fieldCode="AU" term="%22Iampietro+C%22">Iampietro C</searchLink>; INRAE, GeT-PlaGeGenotoul, 31326, Castanet-Tolosan, France.<br /><searchLink fieldCode="AU" term="%22Donnadieu+C%22">Donnadieu C</searchLink>; INRAE, GeT-PlaGeGenotoul, 31326, Castanet-Tolosan, France.<br /><searchLink fieldCode="AU" term="%22Milan+D%22">Milan D</searchLink>; INRAE, GeT-PlaGeGenotoul, 31326, Castanet-Tolosan, France.; GenPhySE, Université de Toulouse, INRAE, ENVT, 31326, Castanet-Tolosan, France.<br /><searchLink fieldCode="AU" term="%22Drouilhet+L%22">Drouilhet L</searchLink>; GenPhySE, Université de Toulouse, INRAE, ENVT, 31326, Castanet-Tolosan, France.<br /><searchLink fieldCode="AU" term="%22Tosser-Klopp+G%22">Tosser-Klopp G</searchLink>; GenPhySE, Université de Toulouse, INRAE, ENVT, 31326, Castanet-Tolosan, France.<br /><searchLink fieldCode="AU" term="%22Boichard+D%22">Boichard D</searchLink>; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France.<br /><searchLink fieldCode="AU" term="%22Klopp+C%22">Klopp C</searchLink>; Genotoul BioinfoBioInfoMics, MIAT UR875, Sigenae, INRAE, 31326, Castanet-Tolosan, France.<br /><searchLink fieldCode="AU" term="%22Sanchez+MP%22">Sanchez MP</searchLink>; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France.<br /><searchLink fieldCode="AU" term="%22Boussaha+M%22">Boussaha M</searchLink>; Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy en Josas, France. mekki.boussaha@inrae.fr.
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  Data: <searchLink fieldCode="JN" term="%22101581293%22">Journal of animal science and biotechnology</searchLink> [J Anim Sci Biotechnol] 2026 Mar 09; Vol. 17 (1). <i>Date of Electronic Publication: </i>2026 Mar 09.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22BioMed+Central%22">BioMed Central </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>101581293 <i>Publication Model: </i>Electronic <i>Cited Medium: </i>Print <i>ISSN: </i>1674-9782 (Print) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2216749782%22">16749782 </searchLink><i>NLM ISO Abbreviation: </i>J Anim Sci Biotechnol <i>Subsets: </i>PubMed not MEDLINE
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