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Detecting healthcare-associated transmission and antifungal resistance in Candida auris via whole genome sequencing.

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Title: Detecting healthcare-associated transmission and antifungal resistance in Candida auris via whole genome sequencing.
Authors: Murphy SG; Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA., Ross T; Microbiology Laboratory, The Johns Hopkins Hospital, Baltimore, Maryland, USA., Fitzgerald A; Microbiology Laboratory, The Johns Hopkins Hospital, Baltimore, Maryland, USA., Gauthier NPG; BugSeq Bioinformatics Inc., Vancouver, British Columbia, Canada., Keller E; Maryland Department of Health Laboratories Administration, Baltimore, Maryland, USA., Barker E; Department of Medicine, Division of Infectious Diseases, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA., Memon W; Microbiology Laboratory, The Johns Hopkins Hospital, Baltimore, Maryland, USA., Chorlton SD; BugSeq Bioinformatics Inc., Vancouver, British Columbia, Canada., Moore T; Maryland Department of Health Laboratories Administration, Baltimore, Maryland, USA., Curless MS; Department of Hospital Epidemiology and Infection Control, The Johns Hopkins Hospital, Baltimore, Maryland, USA., Fabre V; Department of Medicine, Division of Infectious Diseases, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.; Department of Hospital Epidemiology and Infection Control, The Johns Hopkins Hospital, Baltimore, Maryland, USA., Maragakis LL; Department of Medicine, Division of Infectious Diseases, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.; Department of Hospital Epidemiology and Infection Control, The Johns Hopkins Hospital, Baltimore, Maryland, USA., Simner PJ; Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.; Microbiology Laboratory, The Johns Hopkins Hospital, Baltimore, Maryland, USA.; Division of Clinical Microbiology, Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA., Zhang SX; Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.; Microbiology Laboratory, The Johns Hopkins Hospital, Baltimore, Maryland, USA.
Source: Journal of clinical microbiology [J Clin Microbiol] 2026 May 13; Vol. 64 (5), pp. e0134825. Date of Electronic Publication: 2026 Mar 25.
Publication Type: Journal Article
Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 7505564 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1098-660X (Electronic) Linking ISSN: 00951137 NLM ISO Abbreviation: J Clin Microbiol Subsets: MEDLINE
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  Data: Detecting healthcare-associated transmission and antifungal resistance in Candida auris via whole genome sequencing.
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  Data: <searchLink fieldCode="AU" term="%22Murphy+SG%22">Murphy SG</searchLink>; Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.<br /><searchLink fieldCode="AU" term="%22Ross+T%22">Ross T</searchLink>; Microbiology Laboratory, The Johns Hopkins Hospital, Baltimore, Maryland, USA.<br /><searchLink fieldCode="AU" term="%22Fitzgerald+A%22">Fitzgerald A</searchLink>; Microbiology Laboratory, The Johns Hopkins Hospital, Baltimore, Maryland, USA.<br /><searchLink fieldCode="AU" term="%22Gauthier+NPG%22">Gauthier NPG</searchLink>; BugSeq Bioinformatics Inc., Vancouver, British Columbia, Canada.<br /><searchLink fieldCode="AU" term="%22Keller+E%22">Keller E</searchLink>; Maryland Department of Health Laboratories Administration, Baltimore, Maryland, USA.<br /><searchLink fieldCode="AU" term="%22Barker+E%22">Barker E</searchLink>; Department of Medicine, Division of Infectious Diseases, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.<br /><searchLink fieldCode="AU" term="%22Memon+W%22">Memon W</searchLink>; Microbiology Laboratory, The Johns Hopkins Hospital, Baltimore, Maryland, USA.<br /><searchLink fieldCode="AU" term="%22Chorlton+SD%22">Chorlton SD</searchLink>; BugSeq Bioinformatics Inc., Vancouver, British Columbia, Canada.<br /><searchLink fieldCode="AU" term="%22Moore+T%22">Moore T</searchLink>; Maryland Department of Health Laboratories Administration, Baltimore, Maryland, USA.<br /><searchLink fieldCode="AU" term="%22Curless+MS%22">Curless MS</searchLink>; Department of Hospital Epidemiology and Infection Control, The Johns Hopkins Hospital, Baltimore, Maryland, USA.<br /><searchLink fieldCode="AU" term="%22Fabre+V%22">Fabre V</searchLink>; Department of Medicine, Division of Infectious Diseases, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.; Department of Hospital Epidemiology and Infection Control, The Johns Hopkins Hospital, Baltimore, Maryland, USA.<br /><searchLink fieldCode="AU" term="%22Maragakis+LL%22">Maragakis LL</searchLink>; Department of Medicine, Division of Infectious Diseases, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.; Department of Hospital Epidemiology and Infection Control, The Johns Hopkins Hospital, Baltimore, Maryland, USA.<br /><searchLink fieldCode="AU" term="%22Simner+PJ%22">Simner PJ</searchLink>; Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.; Microbiology Laboratory, The Johns Hopkins Hospital, Baltimore, Maryland, USA.; Division of Clinical Microbiology, Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA.<br /><searchLink fieldCode="AU" term="%22Zhang+SX%22">Zhang SX</searchLink>; Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.; Microbiology Laboratory, The Johns Hopkins Hospital, Baltimore, Maryland, USA.
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  Data: <searchLink fieldCode="JN" term="%227505564%22">Journal of clinical microbiology</searchLink> [J Clin Microbiol] 2026 May 13; Vol. 64 (5), pp. e0134825. <i>Date of Electronic Publication: </i>2026 Mar 25.
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