Umi-pipeline-nf: a modular and scalable workflow for UMI-tagged nanopore amplicon analysis with real-time sequencing integration and GPU-acceleration.
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| Title: | Umi-pipeline-nf: a modular and scalable workflow for UMI-tagged nanopore amplicon analysis with real-time sequencing integration and GPU-acceleration. |
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| Authors: | Amstler S; Institute of Genetic Epidemiology, Medical University of Innsbruck, Innsbruck 6020, Austria., Forer L; Institute of Genetic Epidemiology, Medical University of Innsbruck, Innsbruck 6020, Austria., Escherich L; Institute of Genetic Epidemiology, Medical University of Innsbruck, Innsbruck 6020, Austria., Schönherr S; Institute of Genetic Epidemiology, Medical University of Innsbruck, Innsbruck 6020, Austria., Coassin S; Institute of Genetic Epidemiology, Medical University of Innsbruck, Innsbruck 6020, Austria. |
| Source: | Bioinformatics (Oxford, England) [Bioinformatics] 2026 Apr 07; Vol. 42 (4). |
| Publication Type: | Journal Article |
| Journal Info: | Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
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| ISSN: | 1367-4811 |
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| DOI: | 10.1093/bioinformatics/btag160 |
