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MapMyCells: High-performance mapping of unlabeled cell-by-gene data to reference brain taxonomies.

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Title: MapMyCells: High-performance mapping of unlabeled cell-by-gene data to reference brain taxonomies.
Authors: Daniel SF; Allen Institute for Brain Science; Seattle, WA, 98109., Lee C; Allen Institute for Brain Science; Seattle, WA, 98109., Mollenkopf T; Allen Institute for Brain Science; Seattle, WA, 98109., Lee M; Broad Institute of Harvard and MIT, Cambridge, MA, USA., Arbuckle J; Allen Institute for Brain Science; Seattle, WA, 98109., Fiabane E; Allen Institute for Brain Science; Seattle, WA, 98109., Gabitto MI; Allen Institute for Brain Science; Seattle, WA, 98109., Johansen N; Allen Institute for Brain Science; Seattle, WA, 98109., Kapen I; Allen Institute for Brain Science; Seattle, WA, 98109., Kraft AW; Broad Institute of Harvard and MIT, Cambridge, MA, USA., Lai J; Allen Institute for Brain Science; Seattle, WA, 98109., Li SY; Allen Institute for Brain Science; Seattle, WA, 98109., McGinty R; Allen Institute for Brain Science; Seattle, WA, 98109., Miller JA; Allen Institute for Brain Science; Seattle, WA, 98109., Welch-Moosman S; Allen Institute for Brain Science; Seattle, WA, 98109., Otto S; Allen Institute for Brain Science; Seattle, WA, 98109., Sawyer L; Allen Institute for Brain Science; Seattle, WA, 98109., Shepard N; Allen Institute for Brain Science; Seattle, WA, 98109., Thompson CL; Allen Institute for Brain Science; Seattle, WA, 98109., Tjärnberg A; Allen Institute for Brain Science; Seattle, WA, 98109., Waters J; Allen Institute for Brain Science; Seattle, WA, 98109., Zhen X; Allen Institute for Brain Science; Seattle, WA, 98109., Macosko E; Broad Institute of Harvard and MIT, Cambridge, MA, USA.; Department of Psychiatry, Massachusetts General Hospital, Boston MA, USA.; Department of Neurobiology, Harvard Medical School, Boston MA, USA., Lein ES; Allen Institute for Brain Science; Seattle, WA, 98109., Ng L; Allen Institute for Brain Science; Seattle, WA, 98109., Zeng H; Allen Institute for Brain Science; Seattle, WA, 98109., Mufti S; Allen Institute for Brain Science; Seattle, WA, 98109., Yao Z; Allen Institute for Brain Science; Seattle, WA, 98109., Hawrylycz MJ; Allen Institute for Brain Science; Seattle, WA, 98109.
Source: BioRxiv : the preprint server for biology [bioRxiv] 2026 Mar 09. Date of Electronic Publication: 2026 Mar 09.
Publication Type: Journal Article; Preprint
Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE
Database: MEDLINE Ultimate
FullText Text:
  Availability: 0
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DbLabel: MEDLINE Ultimate
An: 41958981
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PubType: Academic Journal
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PreciseRelevancyScore: 0
IllustrationInfo
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  Data: MapMyCells: High-performance mapping of unlabeled cell-by-gene data to reference brain taxonomies.
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  Data: <searchLink fieldCode="AU" term="%22Daniel+SF%22">Daniel SF</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Lee+C%22">Lee C</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Mollenkopf+T%22">Mollenkopf T</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Lee+M%22">Lee M</searchLink>; Broad Institute of Harvard and MIT, Cambridge, MA, USA.<br /><searchLink fieldCode="AU" term="%22Arbuckle+J%22">Arbuckle J</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Fiabane+E%22">Fiabane E</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Gabitto+MI%22">Gabitto MI</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Johansen+N%22">Johansen N</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Kapen+I%22">Kapen I</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Kraft+AW%22">Kraft AW</searchLink>; Broad Institute of Harvard and MIT, Cambridge, MA, USA.<br /><searchLink fieldCode="AU" term="%22Lai+J%22">Lai J</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Li+SY%22">Li SY</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22McGinty+R%22">McGinty R</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Miller+JA%22">Miller JA</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Welch-Moosman+S%22">Welch-Moosman S</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Otto+S%22">Otto S</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Sawyer+L%22">Sawyer L</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Shepard+N%22">Shepard N</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Thompson+CL%22">Thompson CL</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Tjärnberg+A%22">Tjärnberg A</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Waters+J%22">Waters J</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Zhen+X%22">Zhen X</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Macosko+E%22">Macosko E</searchLink>; Broad Institute of Harvard and MIT, Cambridge, MA, USA.; Department of Psychiatry, Massachusetts General Hospital, Boston MA, USA.; Department of Neurobiology, Harvard Medical School, Boston MA, USA.<br /><searchLink fieldCode="AU" term="%22Lein+ES%22">Lein ES</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Ng+L%22">Ng L</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Zeng+H%22">Zeng H</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Mufti+S%22">Mufti S</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Yao+Z%22">Yao Z</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.<br /><searchLink fieldCode="AU" term="%22Hawrylycz+MJ%22">Hawrylycz MJ</searchLink>; Allen Institute for Brain Science; Seattle, WA, 98109.
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  Data: <searchLink fieldCode="JN" term="%22101680187%22">BioRxiv : the preprint server for biology</searchLink> [bioRxiv] 2026 Mar 09. <i>Date of Electronic Publication: </i>2026 Mar 09.
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