Panmap: Scalable phylogeny-guided alignment, genotyping, and placement on pangenomes.
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| Title: | Panmap: Scalable phylogeny-guided alignment, genotyping, and placement on pangenomes. |
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| Authors: | Kramer AM; Department of Biomolecular Engineering, University of California Santa Cruz, Santa Cruz, CA, USA.; Genomics Institute, University of California Santa Cruz, USA., Zhang A; Department of Biomolecular Engineering, University of California Santa Cruz, Santa Cruz, CA, USA.; Genomics Institute, University of California Santa Cruz, USA., Ayala N; Department of Biomolecular Engineering, University of California Santa Cruz, Santa Cruz, CA, USA.; Genomics Institute, University of California Santa Cruz, USA.; Center for Computational Biology, University of California Berkeley, USA., de Sanctis B; Department of Biomolecular Engineering, University of California Santa Cruz, Santa Cruz, CA, USA.; Genomics Institute, University of California Santa Cruz, USA.; Department of Genetics, University of Cambridge, UK.; Ancient Environmental Genomics Initiative for Sustainability, Globe Institute, University of Copenhagen, Copenhagen, Denmark., Karim L; Department of Biomolecular Engineering, University of California Santa Cruz, Santa Cruz, CA, USA.; Genomics Institute, University of California Santa Cruz, USA., Hinrichs AS; Department of Biomolecular Engineering, University of California Santa Cruz, Santa Cruz, CA, USA.; Genomics Institute, University of California Santa Cruz, USA., Walia S; Department of Electrical and Computer Engineering, University of California San Diego, USA., Turakhia Y; Department of Electrical and Computer Engineering, University of California San Diego, USA., Corbett-Detig R; Department of Biomolecular Engineering, University of California Santa Cruz, Santa Cruz, CA, USA.; Genomics Institute, University of California Santa Cruz, USA. |
| Source: | BioRxiv : the preprint server for biology [bioRxiv] 2026 Mar 30. Date of Electronic Publication: 2026 Mar 30. |
| Publication Type: | Journal Article; Preprint |
| Journal Info: | Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE |
| Database: | MEDLINE Ultimate |
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