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An infant nasal microbial gene atlas uncovers intervention-driven microbiome shifts and salt-resistant pathogen expansion.

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Title: An infant nasal microbial gene atlas uncovers intervention-driven microbiome shifts and salt-resistant pathogen expansion.
Authors: Steinberg R; Division of Paediatric Respiratory Medicine and Allergology, Department of Paediatrics, Inselspital, Bern University Hospital, University of Bern, Bern 3010, Switzerland; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA., Pust MM; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Center for Computational and Integrative Biology, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA; Department of Molecular Biology, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA., Arias-Rojas A; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Center for Computational and Integrative Biology, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA., Pishchany G; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA., Ramsey KA; Wal-yan Respiratory Research Centre, The Kids Research Institute Australia, University of Western Australia, Perth, WA 6009, Australia., Kieninger E; Division of Paediatric Respiratory Medicine and Allergology, Department of Paediatrics, Inselspital, Bern University Hospital, University of Bern, Bern 3010, Switzerland., Moeller A; Department of Respiratory Medicine and Children's Research Center, University Children's Hospital Zurich, Zurich 8008, Switzerland., Casaulta C; Division of Paediatric Respiratory Medicine and Allergology, Department of Paediatrics, Inselspital, Bern University Hospital, University of Bern, Bern 3010, Switzerland., Hilty M; Institute for Infectious Diseases, University of Bern, 3010 Bern, Switzerland., Latzin P; Division of Paediatric Respiratory Medicine and Allergology, Department of Paediatrics, Inselspital, Bern University Hospital, University of Bern, Bern 3010, Switzerland., Korten I; Division of Paediatric Respiratory Medicine and Allergology, Department of Paediatrics, Inselspital, Bern University Hospital, University of Bern, Bern 3010, Switzerland. Electronic address: insa.korten@insel.ch., Xavier RJ; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Center for Computational and Integrative Biology, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA; Department of Molecular Biology, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA. Electronic address: xavier@molbio.mgh.harvard.edu.
Corporate Authors: SCILD Study Group, BILD Study Group
Source: Cell host & microbe [Cell Host Microbe] 2026 May 13; Vol. 34 (5), pp. 925-941.e6. Date of Electronic Publication: 2026 Apr 20.
Publication Type: Journal Article
Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 101302316 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1934-6069 (Electronic) Linking ISSN: 19313128 NLM ISO Abbreviation: Cell Host Microbe Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: <searchLink fieldCode="AU" term="%22Steinberg+R%22">Steinberg R</searchLink>; Division of Paediatric Respiratory Medicine and Allergology, Department of Paediatrics, Inselspital, Bern University Hospital, University of Bern, Bern 3010, Switzerland; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.<br /><searchLink fieldCode="AU" term="%22Pust+MM%22">Pust MM</searchLink>; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Center for Computational and Integrative Biology, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA; Department of Molecular Biology, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA.<br /><searchLink fieldCode="AU" term="%22Arias-Rojas+A%22">Arias-Rojas A</searchLink>; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Center for Computational and Integrative Biology, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA.<br /><searchLink fieldCode="AU" term="%22Pishchany+G%22">Pishchany G</searchLink>; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.<br /><searchLink fieldCode="AU" term="%22Ramsey+KA%22">Ramsey KA</searchLink>; Wal-yan Respiratory Research Centre, The Kids Research Institute Australia, University of Western Australia, Perth, WA 6009, Australia.<br /><searchLink fieldCode="AU" term="%22Kieninger+E%22">Kieninger E</searchLink>; Division of Paediatric Respiratory Medicine and Allergology, Department of Paediatrics, Inselspital, Bern University Hospital, University of Bern, Bern 3010, Switzerland.<br /><searchLink fieldCode="AU" term="%22Moeller+A%22">Moeller A</searchLink>; Department of Respiratory Medicine and Children's Research Center, University Children's Hospital Zurich, Zurich 8008, Switzerland.<br /><searchLink fieldCode="AU" term="%22Casaulta+C%22">Casaulta C</searchLink>; Division of Paediatric Respiratory Medicine and Allergology, Department of Paediatrics, Inselspital, Bern University Hospital, University of Bern, Bern 3010, Switzerland.<br /><searchLink fieldCode="AU" term="%22Hilty+M%22">Hilty M</searchLink>; Institute for Infectious Diseases, University of Bern, 3010 Bern, Switzerland.<br /><searchLink fieldCode="AU" term="%22Latzin+P%22">Latzin P</searchLink>; Division of Paediatric Respiratory Medicine and Allergology, Department of Paediatrics, Inselspital, Bern University Hospital, University of Bern, Bern 3010, Switzerland.<br /><searchLink fieldCode="AU" term="%22Korten+I%22">Korten I</searchLink>; Division of Paediatric Respiratory Medicine and Allergology, Department of Paediatrics, Inselspital, Bern University Hospital, University of Bern, Bern 3010, Switzerland. Electronic address: insa.korten@insel.ch.<br /><searchLink fieldCode="AU" term="%22Xavier+RJ%22">Xavier RJ</searchLink>; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Center for Computational and Integrative Biology, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA; Department of Molecular Biology, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA. Electronic address: xavier@molbio.mgh.harvard.edu.
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