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Whole genome sequencing to study SARS-CoV-2 transmission between university students and the surrounding community in Pittsburgh, Pennsylvania, 2020-2021.

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Title: Whole genome sequencing to study SARS-CoV-2 transmission between university students and the surrounding community in Pittsburgh, Pennsylvania, 2020-2021.
Authors: Rangachar Srinivasa V; Microbial Genomic Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA., Griffith MP; Microbial Genomic Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA., Shutt KA; Microbial Genomic Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA., Coyle H; Microbial Genomic Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA., Raabe NJ; Microbial Genomic Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.; Department of Epidemiology, School of Public Health, University of Pittsburgh, Pittsburgh, PA, USA., Waggle KD; Microbial Genomic Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA., Phan T; Department of Pathology, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA., Snyder GM; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.; Department of Infection Control and Hospital Epidemiology, UPMC, Pittsburgh, PA, USA., Pless LL; Microbial Genomic Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA., Van Tyne D; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA., Sundermann AJ; Department of Epidemiology, School of Public Health, University of Pittsburgh, Pittsburgh, PA, USA., Martin EM; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA., Harrison LH; Microbial Genomic Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.; Department of Epidemiology, School of Public Health, University of Pittsburgh, Pittsburgh, PA, USA.
Source: Antimicrobial stewardship & healthcare epidemiology : ASHE [Antimicrob Steward Healthc Epidemiol] 2026 Mar 23; Vol. 6 (1), pp. e62. Date of Electronic Publication: 2026 Mar 23 (Print Publication: 2026).
Publication Type: Journal Article
Journal Info: Publisher: Cambridge University Press Country of Publication: England NLM ID: 9918266096106676 Publication Model: eCollection Cited Medium: Internet ISSN: 2732-494X (Electronic) Linking ISSN: 2732494X NLM ISO Abbreviation: Antimicrob Steward Healthc Epidemiol Subsets: PubMed not MEDLINE
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  Data: Whole genome sequencing to study SARS-CoV-2 transmission between university students and the surrounding community in Pittsburgh, Pennsylvania, 2020-2021.
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  Data: <searchLink fieldCode="AU" term="%22Rangachar+Srinivasa+V%22">Rangachar Srinivasa V</searchLink>; Microbial Genomic Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.<br /><searchLink fieldCode="AU" term="%22Griffith+MP%22">Griffith MP</searchLink>; Microbial Genomic Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.<br /><searchLink fieldCode="AU" term="%22Shutt+KA%22">Shutt KA</searchLink>; Microbial Genomic Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.<br /><searchLink fieldCode="AU" term="%22Coyle+H%22">Coyle H</searchLink>; Microbial Genomic Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.<br /><searchLink fieldCode="AU" term="%22Raabe+NJ%22">Raabe NJ</searchLink>; Microbial Genomic Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.; Department of Epidemiology, School of Public Health, University of Pittsburgh, Pittsburgh, PA, USA.<br /><searchLink fieldCode="AU" term="%22Waggle+KD%22">Waggle KD</searchLink>; Microbial Genomic Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.<br /><searchLink fieldCode="AU" term="%22Phan+T%22">Phan T</searchLink>; Department of Pathology, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.<br /><searchLink fieldCode="AU" term="%22Snyder+GM%22">Snyder GM</searchLink>; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.; Department of Infection Control and Hospital Epidemiology, UPMC, Pittsburgh, PA, USA.<br /><searchLink fieldCode="AU" term="%22Pless+LL%22">Pless LL</searchLink>; Microbial Genomic Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.<br /><searchLink fieldCode="AU" term="%22Van+Tyne+D%22">Van Tyne D</searchLink>; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.<br /><searchLink fieldCode="AU" term="%22Sundermann+AJ%22">Sundermann AJ</searchLink>; Department of Epidemiology, School of Public Health, University of Pittsburgh, Pittsburgh, PA, USA.<br /><searchLink fieldCode="AU" term="%22Martin+EM%22">Martin EM</searchLink>; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.<br /><searchLink fieldCode="AU" term="%22Harrison+LH%22">Harrison LH</searchLink>; Microbial Genomic Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.; Department of Epidemiology, School of Public Health, University of Pittsburgh, Pittsburgh, PA, USA.
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  Data: <searchLink fieldCode="JN" term="%229918266096106676%22">Antimicrobial stewardship & healthcare epidemiology : ASHE</searchLink> [Antimicrob Steward Healthc Epidemiol] 2026 Mar 23; Vol. 6 (1), pp. e62. <i>Date of Electronic Publication: </i>2026 Mar 23 (<i>Print Publication: </i>2026).
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Cambridge+University+Press%22">Cambridge University Press </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>9918266096106676 <i>Publication Model: </i>eCollection <i>Cited Medium: </i>Internet <i>ISSN: </i>2732-494X (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%222732494X%22">2732494X </searchLink><i>NLM ISO Abbreviation: </i>Antimicrob Steward Healthc Epidemiol <i>Subsets: </i>PubMed not MEDLINE
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