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Decentralized nanopore genomics reveals diverse Klebsiella pneumoniae and no evidence of patient-patient transmission in a New Zealand hospital.

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Title: Decentralized nanopore genomics reveals diverse Klebsiella pneumoniae and no evidence of patient-patient transmission in a New Zealand hospital.
Authors: White RT; New Zealand Institute for Public Health and Forensic Science, Health Security, Porirua 5022, New Zealand., Bakker S; New Zealand Institute for Public Health and Forensic Science, Health Security, Porirua 5022, New Zealand., Burton M; Awanui Labs Wellington, Department of Microbiology and Molecular Pathology, Wellington 6021, New Zealand., Dyet K; New Zealand Institute for Public Health and Forensic Science, Health Security, Porirua 5022, New Zealand., Elvy J; New Zealand Institute for Public Health and Forensic Science, Health Security, Porirua 5022, New Zealand.; Awanui Labs Dunedin, Department of Microbiology and Molecular Pathology, Dunedin 9016, New Zealand., Eustace A; New Zealand Institute for Public Health and Forensic Science, Health Security, Porirua 5022, New Zealand., Griffith MP; Microbial Genomics Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA 15261, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA., Hutton S; Awanui Labs Wellington, Department of Microbiology and Molecular Pathology, Wellington 6021, New Zealand., Lees J; New Zealand Institute for Public Health and Forensic Science, Health Security, Porirua 5022, New Zealand., Raabe NJ; Microbial Genomics Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA 15261, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.; School of Public Health, Department of Epidemiology, University of Pittsburgh, Pittsburgh, PA 15261, USA., Su B; Awanui Labs Wellington, Department of Microbiology and Molecular Pathology, Wellington 6021, New Zealand., Tiong A; New Zealand Institute for Public Health and Forensic Science, Health Security, Porirua 5022, New Zealand., Winter DJ; New Zealand Institute for Public Health and Forensic Science, Health Security, Porirua 5022, New Zealand., Wyres KL; Department of Infectious Diseases, School of Translational Medicine, Monash University, Melbourne 3004, Australia.; Monash University, Centre to Impact AMR, Clayton 3800, Australia.; Department of Infection Biology, Faculty of Infectious and Tropical Diseases, London School of Hygiene, Tropical Medicine, London WC1E 7HT, UK., Bloomfield M; Te Whatu Ora/Health New Zealand, Infection Services, Capital, Coast & Hutt Valley, Wellington 6021, New Zealand.; Awanui Labs Wellington, Department of Microbiology and Molecular Pathology, Wellington 6021, New Zealand.
Source: Microbial genomics [Microb Genom] 2026 Apr; Vol. 12 (4).
Publication Type: Journal Article
Journal Info: Publisher: Microbiology Society Country of Publication: England NLM ID: 101671820 Publication Model: Print Cited Medium: Internet ISSN: 2057-5858 (Electronic) Linking ISSN: 20575858 NLM ISO Abbreviation: Microb Genom Subsets: MEDLINE
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  Data: Decentralized nanopore genomics reveals diverse Klebsiella pneumoniae and no evidence of patient-patient transmission in a New Zealand hospital.
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  Data: <searchLink fieldCode="AU" term="%22White+RT%22">White RT</searchLink>; New Zealand Institute for Public Health and Forensic Science, Health Security, Porirua 5022, New Zealand.<br /><searchLink fieldCode="AU" term="%22Bakker+S%22">Bakker S</searchLink>; New Zealand Institute for Public Health and Forensic Science, Health Security, Porirua 5022, New Zealand.<br /><searchLink fieldCode="AU" term="%22Burton+M%22">Burton M</searchLink>; Awanui Labs Wellington, Department of Microbiology and Molecular Pathology, Wellington 6021, New Zealand.<br /><searchLink fieldCode="AU" term="%22Dyet+K%22">Dyet K</searchLink>; New Zealand Institute for Public Health and Forensic Science, Health Security, Porirua 5022, New Zealand.<br /><searchLink fieldCode="AU" term="%22Elvy+J%22">Elvy J</searchLink>; New Zealand Institute for Public Health and Forensic Science, Health Security, Porirua 5022, New Zealand.; Awanui Labs Dunedin, Department of Microbiology and Molecular Pathology, Dunedin 9016, New Zealand.<br /><searchLink fieldCode="AU" term="%22Eustace+A%22">Eustace A</searchLink>; New Zealand Institute for Public Health and Forensic Science, Health Security, Porirua 5022, New Zealand.<br /><searchLink fieldCode="AU" term="%22Griffith+MP%22">Griffith MP</searchLink>; Microbial Genomics Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA 15261, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.<br /><searchLink fieldCode="AU" term="%22Hutton+S%22">Hutton S</searchLink>; Awanui Labs Wellington, Department of Microbiology and Molecular Pathology, Wellington 6021, New Zealand.<br /><searchLink fieldCode="AU" term="%22Lees+J%22">Lees J</searchLink>; New Zealand Institute for Public Health and Forensic Science, Health Security, Porirua 5022, New Zealand.<br /><searchLink fieldCode="AU" term="%22Raabe+NJ%22">Raabe NJ</searchLink>; Microbial Genomics Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, PA 15261, USA.; Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.; School of Public Health, Department of Epidemiology, University of Pittsburgh, Pittsburgh, PA 15261, USA.<br /><searchLink fieldCode="AU" term="%22Su+B%22">Su B</searchLink>; Awanui Labs Wellington, Department of Microbiology and Molecular Pathology, Wellington 6021, New Zealand.<br /><searchLink fieldCode="AU" term="%22Tiong+A%22">Tiong A</searchLink>; New Zealand Institute for Public Health and Forensic Science, Health Security, Porirua 5022, New Zealand.<br /><searchLink fieldCode="AU" term="%22Winter+DJ%22">Winter DJ</searchLink>; New Zealand Institute for Public Health and Forensic Science, Health Security, Porirua 5022, New Zealand.<br /><searchLink fieldCode="AU" term="%22Wyres+KL%22">Wyres KL</searchLink>; Department of Infectious Diseases, School of Translational Medicine, Monash University, Melbourne 3004, Australia.; Monash University, Centre to Impact AMR, Clayton 3800, Australia.; Department of Infection Biology, Faculty of Infectious and Tropical Diseases, London School of Hygiene, Tropical Medicine, London WC1E 7HT, UK.<br /><searchLink fieldCode="AU" term="%22Bloomfield+M%22">Bloomfield M</searchLink>; Te Whatu Ora/Health New Zealand, Infection Services, Capital, Coast & Hutt Valley, Wellington 6021, New Zealand.; Awanui Labs Wellington, Department of Microbiology and Molecular Pathology, Wellington 6021, New Zealand.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Microbiology+Society%22">Microbiology Society </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>101671820 <i>Publication Model: </i>Print <i>Cited Medium: </i>Internet <i>ISSN: </i>2057-5858 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2220575858%22">20575858 </searchLink><i>NLM ISO Abbreviation: </i>Microb Genom <i>Subsets: </i>MEDLINE
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              Text: 2026 Apr
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