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A standardized workflow for typing S. marcescens outbreaks using FT-IR spectroscopy.

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Title: A standardized workflow for typing S. marcescens outbreaks using FT-IR spectroscopy.
Authors: Passaris I; Bacterial Diseases Unit, Sciensano, Brussels, Belgium. ioannis.passaris@sciensano.be., Van Goethem S; Laboratory of Medical Microbiology, Vaccine and Infectious Disease Institute, Universiteit Antwerpen, Antwerp, Belgium. sam.vangoethem@uantwerpen.be.; Hospital Outbreak Support Team (HOST), ZAS Hospital, Antwerp, Belgium. sam.vangoethem@uantwerpen.be., Crombé F; Vitality Research Group, Laboratory of Microbiology and Infection Control, Department of Clinical Biology, Vrije Universiteit Brussel (VUB), Universitair Ziekenhuis Brussel (UZ Brussel), Brussels, Belgium., Hamerlinck H; Departement of Medical Microbiology, Ghent University, Ghent, Belgium.; Department of Diagnostics Sciences, Faculty of Medicine and Health Sciences, Ghent University, Ghent, Belgium., Desmet S; Department of Laboratory Medicine, UZ Leuven, Leuven, Belgium.; Department of Microbiology, Immunology and Transplantation, KU Leuven, Leuven, Belgium., Naesens R; Laboratory of Medical Microbiology, ZAS Hospital, Antwerp, Belgium., Willems P; Laboratory of Medical Microbiology, ZAS Hospital, Antwerp, Belgium., De Geyter D; Vitality Research Group, Laboratory of Microbiology and Infection Control, Department of Clinical Biology, Vrije Universiteit Brussel (VUB), Universitair Ziekenhuis Brussel (UZ Brussel), Brussels, Belgium., Leroux-Roels I; Departement of Medical Microbiology, Ghent University, Ghent, Belgium.; Department of Diagnostics Sciences, Faculty of Medicine and Health Sciences, Ghent University, Ghent, Belgium.; Department of infection control, Ghent University, Ghent, Belgium., Glupczynski Y; Laboratory of Medical Microbiology, Vaccine and Infectious Disease Institute, Universiteit Antwerpen, Antwerp, Belgium., Malhotra-Kumar S; Laboratory of Medical Microbiology, Vaccine and Infectious Disease Institute, Universiteit Antwerpen, Antwerp, Belgium., Goossens H; Laboratory of Medical Microbiology, Vaccine and Infectious Disease Institute, Universiteit Antwerpen, Antwerp, Belgium., Ceyssens PJ; Bacterial Diseases Unit, Sciensano, Brussels, Belgium.
Source: European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology [Eur J Clin Microbiol Infect Dis] 2026 May 12. Date of Electronic Publication: 2026 May 12.
Publication Type: Journal Article
Journal Info: Publisher: Springer Country of Publication: Germany NLM ID: 8804297 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1435-4373 (Electronic) Linking ISSN: 09349723 NLM ISO Abbreviation: Eur J Clin Microbiol Infect Dis Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: A standardized workflow for typing S. marcescens outbreaks using FT-IR spectroscopy.
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  Data: <searchLink fieldCode="AU" term="%22Passaris+I%22">Passaris I</searchLink>; Bacterial Diseases Unit, Sciensano, Brussels, Belgium. ioannis.passaris@sciensano.be.<br /><searchLink fieldCode="AU" term="%22Van+Goethem+S%22">Van Goethem S</searchLink>; Laboratory of Medical Microbiology, Vaccine and Infectious Disease Institute, Universiteit Antwerpen, Antwerp, Belgium. sam.vangoethem@uantwerpen.be.; Hospital Outbreak Support Team (HOST), ZAS Hospital, Antwerp, Belgium. sam.vangoethem@uantwerpen.be.<br /><searchLink fieldCode="AU" term="%22Crombé+F%22">Crombé F</searchLink>; Vitality Research Group, Laboratory of Microbiology and Infection Control, Department of Clinical Biology, Vrije Universiteit Brussel (VUB), Universitair Ziekenhuis Brussel (UZ Brussel), Brussels, Belgium.<br /><searchLink fieldCode="AU" term="%22Hamerlinck+H%22">Hamerlinck H</searchLink>; Departement of Medical Microbiology, Ghent University, Ghent, Belgium.; Department of Diagnostics Sciences, Faculty of Medicine and Health Sciences, Ghent University, Ghent, Belgium.<br /><searchLink fieldCode="AU" term="%22Desmet+S%22">Desmet S</searchLink>; Department of Laboratory Medicine, UZ Leuven, Leuven, Belgium.; Department of Microbiology, Immunology and Transplantation, KU Leuven, Leuven, Belgium.<br /><searchLink fieldCode="AU" term="%22Naesens+R%22">Naesens R</searchLink>; Laboratory of Medical Microbiology, ZAS Hospital, Antwerp, Belgium.<br /><searchLink fieldCode="AU" term="%22Willems+P%22">Willems P</searchLink>; Laboratory of Medical Microbiology, ZAS Hospital, Antwerp, Belgium.<br /><searchLink fieldCode="AU" term="%22De+Geyter+D%22">De Geyter D</searchLink>; Vitality Research Group, Laboratory of Microbiology and Infection Control, Department of Clinical Biology, Vrije Universiteit Brussel (VUB), Universitair Ziekenhuis Brussel (UZ Brussel), Brussels, Belgium.<br /><searchLink fieldCode="AU" term="%22Leroux-Roels+I%22">Leroux-Roels I</searchLink>; Departement of Medical Microbiology, Ghent University, Ghent, Belgium.; Department of Diagnostics Sciences, Faculty of Medicine and Health Sciences, Ghent University, Ghent, Belgium.; Department of infection control, Ghent University, Ghent, Belgium.<br /><searchLink fieldCode="AU" term="%22Glupczynski+Y%22">Glupczynski Y</searchLink>; Laboratory of Medical Microbiology, Vaccine and Infectious Disease Institute, Universiteit Antwerpen, Antwerp, Belgium.<br /><searchLink fieldCode="AU" term="%22Malhotra-Kumar+S%22">Malhotra-Kumar S</searchLink>; Laboratory of Medical Microbiology, Vaccine and Infectious Disease Institute, Universiteit Antwerpen, Antwerp, Belgium.<br /><searchLink fieldCode="AU" term="%22Goossens+H%22">Goossens H</searchLink>; Laboratory of Medical Microbiology, Vaccine and Infectious Disease Institute, Universiteit Antwerpen, Antwerp, Belgium.<br /><searchLink fieldCode="AU" term="%22Ceyssens+PJ%22">Ceyssens PJ</searchLink>; Bacterial Diseases Unit, Sciensano, Brussels, Belgium.
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