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Selecting methods for draft GEM generation in multicellular eukaryotes: a comparative analysis.

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Title: Selecting methods for draft GEM generation in multicellular eukaryotes: a comparative analysis.
Authors: Jiménez NE; Institute for Biological and Medical Engineering, Pontificia Universidad Católica de Chile, Santiago, Chile. natalia.jimenez@uc.cl.; Department of Chemical and Bioprocess Engineering, School of Engineering, Pontificia Universidad Católica de Chile, Santiago, Chile. natalia.jimenez@uc.cl., Espinoza M; Department of Chemical Engineering, Biotechnology and Materials, Faculty of Physical and Mathematical Sciences (DIQBM), University of Chile, Santiago, Chile.; Centre for Biotechnology and Bioengineering (CeBiB), University of Chile, Santiago, Chile., Mejías S; Department of Chemical Engineering, Biotechnology and Materials, Faculty of Physical and Mathematical Sciences (DIQBM), University of Chile, Santiago, Chile.; Centre for Biotechnology and Bioengineering (CeBiB), University of Chile, Santiago, Chile., Mendoza SN; Center for Mathematical Modeling (CMM), University of Chile, Santiago, Chile., Segovia I; Department of Chemical Engineering, Biotechnology and Materials, Faculty of Physical and Mathematical Sciences (DIQBM), University of Chile, Santiago, Chile.; Centre for Biotechnology and Bioengineering (CeBiB), University of Chile, Santiago, Chile., Salgado JC; Department of Chemical Engineering, Biotechnology and Materials, Faculty of Physical and Mathematical Sciences (DIQBM), University of Chile, Santiago, Chile.; Centre for Biotechnology and Bioengineering (CeBiB), University of Chile, Santiago, Chile., Conca C; Centre for Biotechnology and Bioengineering (CeBiB), University of Chile, Santiago, Chile.; Center for Mathematical Modeling (CMM), University of Chile, Santiago, Chile., Gerdtzen ZP; Department of Chemical Engineering, Biotechnology and Materials, Faculty of Physical and Mathematical Sciences (DIQBM), University of Chile, Santiago, Chile.; Centre for Biotechnology and Bioengineering (CeBiB), University of Chile, Santiago, Chile.
Source: BMC bioinformatics [BMC Bioinformatics] 2026 May 22. Date of Electronic Publication: 2026 May 22.
Publication Type: Journal Article
Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1471-2105 (Electronic) Linking ISSN: 14712105 NLM ISO Abbreviation: BMC Bioinformatics Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Selecting methods for draft GEM generation in multicellular eukaryotes: a comparative analysis.
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  Data: <searchLink fieldCode="AU" term="%22Jiménez+NE%22">Jiménez NE</searchLink>; Institute for Biological and Medical Engineering, Pontificia Universidad Católica de Chile, Santiago, Chile. natalia.jimenez@uc.cl.; Department of Chemical and Bioprocess Engineering, School of Engineering, Pontificia Universidad Católica de Chile, Santiago, Chile. natalia.jimenez@uc.cl.<br /><searchLink fieldCode="AU" term="%22Espinoza+M%22">Espinoza M</searchLink>; Department of Chemical Engineering, Biotechnology and Materials, Faculty of Physical and Mathematical Sciences (DIQBM), University of Chile, Santiago, Chile.; Centre for Biotechnology and Bioengineering (CeBiB), University of Chile, Santiago, Chile.<br /><searchLink fieldCode="AU" term="%22Mejías+S%22">Mejías S</searchLink>; Department of Chemical Engineering, Biotechnology and Materials, Faculty of Physical and Mathematical Sciences (DIQBM), University of Chile, Santiago, Chile.; Centre for Biotechnology and Bioengineering (CeBiB), University of Chile, Santiago, Chile.<br /><searchLink fieldCode="AU" term="%22Mendoza+SN%22">Mendoza SN</searchLink>; Center for Mathematical Modeling (CMM), University of Chile, Santiago, Chile.<br /><searchLink fieldCode="AU" term="%22Segovia+I%22">Segovia I</searchLink>; Department of Chemical Engineering, Biotechnology and Materials, Faculty of Physical and Mathematical Sciences (DIQBM), University of Chile, Santiago, Chile.; Centre for Biotechnology and Bioengineering (CeBiB), University of Chile, Santiago, Chile.<br /><searchLink fieldCode="AU" term="%22Salgado+JC%22">Salgado JC</searchLink>; Department of Chemical Engineering, Biotechnology and Materials, Faculty of Physical and Mathematical Sciences (DIQBM), University of Chile, Santiago, Chile.; Centre for Biotechnology and Bioengineering (CeBiB), University of Chile, Santiago, Chile.<br /><searchLink fieldCode="AU" term="%22Conca+C%22">Conca C</searchLink>; Centre for Biotechnology and Bioengineering (CeBiB), University of Chile, Santiago, Chile.; Center for Mathematical Modeling (CMM), University of Chile, Santiago, Chile.<br /><searchLink fieldCode="AU" term="%22Gerdtzen+ZP%22">Gerdtzen ZP</searchLink>; Department of Chemical Engineering, Biotechnology and Materials, Faculty of Physical and Mathematical Sciences (DIQBM), University of Chile, Santiago, Chile.; Centre for Biotechnology and Bioengineering (CeBiB), University of Chile, Santiago, Chile.
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  Data: <searchLink fieldCode="JN" term="%22100965194%22">BMC bioinformatics</searchLink> [BMC Bioinformatics] 2026 May 22. <i>Date of Electronic Publication: </i>2026 May 22.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22BioMed+Central%22">BioMed Central </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>100965194 <i>Publication Model: </i>Print-Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>1471-2105 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2214712105%22">14712105 </searchLink><i>NLM ISO Abbreviation: </i>BMC Bioinformatics <i>Subsets: </i>MEDLINE
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