CUPID-seq enables highly multiplexed amplicon sequencing via combinatorial in-line dual indexing.

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Bibliographic Details
Title: CUPID-seq enables highly multiplexed amplicon sequencing via combinatorial in-line dual indexing.
Authors: Fu B; Department of Bioengineering, Stanford University, Stanford, CA 94305, USA., Porter RL; Biophysics Training Program, Stanford, CA 94305, USA., Shi H; Department of Bioengineering, Stanford University, Stanford, CA 94305, USA., Ea AC; Department of Molecular Biology and Biochemistry, University of California, Irvine, Irvine, CA 92697, USA., Espeleta AM; Center for Complex Biological Systems, University of California, Irvine, Irvine, CA 92697, USA., Ambat A; Department of Bioengineering, Stanford University, Stanford, CA 94305, USA., Relman DA; Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA 94305, USA.; Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305.; Infectious Diseases Section, Veterans Affairs Palo Alto Health Care System, Palo Alto, CA 94304, USA., Huang KC; Department of Bioengineering, Stanford University, Stanford, CA 94305, USA.; Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA 94305, USA.; Chan Zuckerberg Biohub, San Francisco, CA 94158, USA., Xue KS; Department of Molecular Biology and Biochemistry, University of California, Irvine, Irvine, CA 92697, USA.; Department of Ecology and Evolutionary Biology, University of California, Irvine, Irvine, CA 92697, USA.
Source: BioRxiv : the preprint server for biology [bioRxiv] 2026 May 21. Date of Electronic Publication: 2026 May 21.
Publication Type: Journal Article; Preprint
Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE
Database: MEDLINE Ultimate
Description
ISSN:2692-8205
DOI:10.64898/2026.05.20.726713