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Interconnected influences of diet, gut microbiome, and metabolome on cognition across three metabolomics platforms.

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Title: Interconnected influences of diet, gut microbiome, and metabolome on cognition across three metabolomics platforms.
Authors: Khatib L; Department of Pediatrics, University of California, San Diego, La Jolla, California, USA.; Neurosciences Graduate Program, University of California, San Diego, La Jolla, California, USA., Patel L; Department of Pediatrics, University of California, San Diego, La Jolla, California, USA.; Bioinformatics and Systems Biology Program, University of California, San Diego, La Jolla, CA, USA.; Medical Scientist Training Program, University of California, San Diego, La Jolla, CA, USA., MahmoudianDehkordi S; Department of Psychiatry and Behavioral Sciences, Duke University, Durham, NC, USA., Labus JS; G. Oppenheimer Center for Neurobiology of Stress and Resilience, University of California, Los Angeles, California, USA.; Vatche and Tamar Manoukian Division of Digestive Diseases, University of California, Los Angeles, California, USA.; UCLA Goodman-Luskin Microbiome Center, University of California, Los Angeles, Integrative Biostatistics and Bioinformatics Core and Neuroimaging Core, California, USA.; David Geffen School of Medicine, University of California, Los Angeles, California, USA., Agongo J; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA., Borkowski K; Genome Center, University of California, Davis, Davis, CA 95616, USA., Ambre M; Department of Pediatrics, University of California, San Diego, La Jolla, California, USA., Brydges C; Department of Psychiatry and Behavioral Sciences, Duke University, Durham, NC, USA., Schimmel L; Department of Psychiatry and Behavioral Sciences, Duke University, Durham, NC, USA., Blach C; Duke Molecular Physiology Institute, Duke University, Durham, NC, 27701, USA., Karu N; Tasmanian Independent Metabolomics and Analytical Chemistry Solutions (TIMACS), Hobart, Tasmania, 7008, Australia., Taylor M; Department of Dietetics and Nutrition, University of Kansas Medical Center, Kansas City, Kansas 66160., Diaz E; Department of Psychiatry and Behavioral Sciences, Duke University, Durham, NC, USA.; Department of Research and Health Promotion, San Ysidro Health, San Diego, CA., Brosch J; Department of Neurology, Indiana University School of Medicine, Indianapolis, IN., Bendlin B; Wisconsin Alzheimer's Disease Research Center, University of Wisconsin, Madison, WI.; Institute of Neuroscience and Physiology, the Sahlgrenska Academy at the University of Gothenburg, Mölndal, Sweden., Swerdlow R; University of Kansas Alzheimer's Disease Research Center, Fairway, Kansas 66205., Henderson VW; Departments of Epidemiology & Population Health and of Neurology & Neurological Sciences, Stanford University, Stanford, CA 94305., Chen DS; University of California Davis Alzheimer Disease Research Center, Sacramento, CA., Saykin AJ; Indiana Alzheimer's Disease Research Center and Department of Radiology and Imaging Sciences, Indiana University School of Medicine, Indianapolis, IN., Craft S; Wake Forest University School of Medicine Alzheimer's Disease Research Center, Winston-Salem, NC, 27157., Brewer J; Shiley-Marcos Alzheimer's Disease Research Center, Department of Neurosciences, University of California, San Diego, La Jolla, CA, USA., Wisniewski T; New York University Grossman School of Medicine, New York, NY, USA., Roberson ED; Department of Neurology, University of Alabama at Birmingham, Birmingham, AL, USA., Dorrestein PC; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.; Center for Microbiome Innovation, University of California, San Diego, La Jolla, CA, USA.; Department of Pharmacology, University of California, San Diego, La Jolla, CA, 92093, USA.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA., Kaddurah-Daouk R; Department of Psychiatry and Behavioral Sciences, Duke University, Durham, NC, USA.; Duke Institute of Brain Sciences, Duke University, Durham, NC, USA.; Department of Medicine, Duke University, Durham, NC, USA., Knight R; Department of Pediatrics, University of California, San Diego, La Jolla, California, USA.; Center for Microbiome Innovation, University of California, San Diego, La Jolla, CA, USA.; Department of Computer Science and Engineering, University of California, San Diego, La Jolla, CA, USA.; Shu Chien-Gene Lay Department of Bioengineering, University of California, San Diego, La Jolla, CA, USA.; Halıcıoğlu Data Science Institute, University of California, San Diego, La Jolla, CA, USA.; Hong Kong University of Science and Technology Jockey Club Institute for Advanced Study, Hong Kong University of Science and Technology, Hong Kong SAR, China.
Corporate Authors: Alzheimer Gut Microbiome Project Consortium
Source: Research square [Res Sq] 2026 Jun 11. Date of Electronic Publication: 2026 Jun 11.
Publication Type: Journal Article; Preprint
Journal Info: Country of Publication: United States NLM ID: 101768035 Publication Model: Electronic Cited Medium: Internet ISSN: 2693-5015 (Electronic) Linking ISSN: 26935015 NLM ISO Abbreviation: Res Sq Subsets: PubMed not MEDLINE
Database: MEDLINE Ultimate
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PubType: Academic Journal
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  Data: Interconnected influences of diet, gut microbiome, and metabolome on cognition across three metabolomics platforms.
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  Data: <searchLink fieldCode="AU" term="%22Khatib+L%22">Khatib L</searchLink>; Department of Pediatrics, University of California, San Diego, La Jolla, California, USA.; Neurosciences Graduate Program, University of California, San Diego, La Jolla, California, USA.<br /><searchLink fieldCode="AU" term="%22Patel+L%22">Patel L</searchLink>; Department of Pediatrics, University of California, San Diego, La Jolla, California, USA.; Bioinformatics and Systems Biology Program, University of California, San Diego, La Jolla, CA, USA.; Medical Scientist Training Program, University of California, San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22MahmoudianDehkordi+S%22">MahmoudianDehkordi S</searchLink>; Department of Psychiatry and Behavioral Sciences, Duke University, Durham, NC, USA.<br /><searchLink fieldCode="AU" term="%22Labus+JS%22">Labus JS</searchLink>; G. Oppenheimer Center for Neurobiology of Stress and Resilience, University of California, Los Angeles, California, USA.; Vatche and Tamar Manoukian Division of Digestive Diseases, University of California, Los Angeles, California, USA.; UCLA Goodman-Luskin Microbiome Center, University of California, Los Angeles, Integrative Biostatistics and Bioinformatics Core and Neuroimaging Core, California, USA.; David Geffen School of Medicine, University of California, Los Angeles, California, USA.<br /><searchLink fieldCode="AU" term="%22Agongo+J%22">Agongo J</searchLink>; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Borkowski+K%22">Borkowski K</searchLink>; Genome Center, University of California, Davis, Davis, CA 95616, USA.<br /><searchLink fieldCode="AU" term="%22Ambre+M%22">Ambre M</searchLink>; Department of Pediatrics, University of California, San Diego, La Jolla, California, USA.<br /><searchLink fieldCode="AU" term="%22Brydges+C%22">Brydges C</searchLink>; Department of Psychiatry and Behavioral Sciences, Duke University, Durham, NC, USA.<br /><searchLink fieldCode="AU" term="%22Schimmel+L%22">Schimmel L</searchLink>; Department of Psychiatry and Behavioral Sciences, Duke University, Durham, NC, USA.<br /><searchLink fieldCode="AU" term="%22Blach+C%22">Blach C</searchLink>; Duke Molecular Physiology Institute, Duke University, Durham, NC, 27701, USA.<br /><searchLink fieldCode="AU" term="%22Karu+N%22">Karu N</searchLink>; Tasmanian Independent Metabolomics and Analytical Chemistry Solutions (TIMACS), Hobart, Tasmania, 7008, Australia.<br /><searchLink fieldCode="AU" term="%22Taylor+M%22">Taylor M</searchLink>; Department of Dietetics and Nutrition, University of Kansas Medical Center, Kansas City, Kansas 66160.<br /><searchLink fieldCode="AU" term="%22Diaz+E%22">Diaz E</searchLink>; Department of Psychiatry and Behavioral Sciences, Duke University, Durham, NC, USA.; Department of Research and Health Promotion, San Ysidro Health, San Diego, CA.<br /><searchLink fieldCode="AU" term="%22Brosch+J%22">Brosch J</searchLink>; Department of Neurology, Indiana University School of Medicine, Indianapolis, IN.<br /><searchLink fieldCode="AU" term="%22Bendlin+B%22">Bendlin B</searchLink>; Wisconsin Alzheimer's Disease Research Center, University of Wisconsin, Madison, WI.; Institute of Neuroscience and Physiology, the Sahlgrenska Academy at the University of Gothenburg, Mölndal, Sweden.<br /><searchLink fieldCode="AU" term="%22Swerdlow+R%22">Swerdlow R</searchLink>; University of Kansas Alzheimer's Disease Research Center, Fairway, Kansas 66205.<br /><searchLink fieldCode="AU" term="%22Henderson+VW%22">Henderson VW</searchLink>; Departments of Epidemiology & Population Health and of Neurology & Neurological Sciences, Stanford University, Stanford, CA 94305.<br /><searchLink fieldCode="AU" term="%22Chen+DS%22">Chen DS</searchLink>; University of California Davis Alzheimer Disease Research Center, Sacramento, CA.<br /><searchLink fieldCode="AU" term="%22Saykin+AJ%22">Saykin AJ</searchLink>; Indiana Alzheimer's Disease Research Center and Department of Radiology and Imaging Sciences, Indiana University School of Medicine, Indianapolis, IN.<br /><searchLink fieldCode="AU" term="%22Craft+S%22">Craft S</searchLink>; Wake Forest University School of Medicine Alzheimer's Disease Research Center, Winston-Salem, NC, 27157.<br /><searchLink fieldCode="AU" term="%22Brewer+J%22">Brewer J</searchLink>; Shiley-Marcos Alzheimer's Disease Research Center, Department of Neurosciences, University of California, San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Wisniewski+T%22">Wisniewski T</searchLink>; New York University Grossman School of Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Roberson+ED%22">Roberson ED</searchLink>; Department of Neurology, University of Alabama at Birmingham, Birmingham, AL, USA.<br /><searchLink fieldCode="AU" term="%22Dorrestein+PC%22">Dorrestein PC</searchLink>; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.; Center for Microbiome Innovation, University of California, San Diego, La Jolla, CA, USA.; Department of Pharmacology, University of California, San Diego, La Jolla, CA, 92093, USA.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Kaddurah-Daouk+R%22">Kaddurah-Daouk R</searchLink>; Department of Psychiatry and Behavioral Sciences, Duke University, Durham, NC, USA.; Duke Institute of Brain Sciences, Duke University, Durham, NC, USA.; Department of Medicine, Duke University, Durham, NC, USA.<br /><searchLink fieldCode="AU" term="%22Knight+R%22">Knight R</searchLink>; Department of Pediatrics, University of California, San Diego, La Jolla, California, USA.; Center for Microbiome Innovation, University of California, San Diego, La Jolla, CA, USA.; Department of Computer Science and Engineering, University of California, San Diego, La Jolla, CA, USA.; Shu Chien-Gene Lay Department of Bioengineering, University of California, San Diego, La Jolla, CA, USA.; Halıcıoğlu Data Science Institute, University of California, San Diego, La Jolla, CA, USA.; Hong Kong University of Science and Technology Jockey Club Institute for Advanced Study, Hong Kong University of Science and Technology, Hong Kong SAR, China.
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