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Integrative cross-sample alignment and spatially differential gene analysis for spatial transcriptomics.

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Title: Integrative cross-sample alignment and spatially differential gene analysis for spatial transcriptomics.
Authors: Tan Y; Research Institute of Intelligent Complex Systems, Fudan University, Shanghai, China.; Institute of Science and Technology for Brain-Inspired Intelligence, Fudan University, Shanghai, China.; Center for Integrative Spatial-Omics Research, Fudan University, Shanghai, China., Wang Z; Research Institute of Intelligent Complex Systems, Fudan University, Shanghai, China.; Shanghai Center for Mathematical Sciences, Fudan University, Shanghai, China., Wang A; Department of Cardiology, Zhongshan Hospital, Fudan University, Shanghai, China.; Hypertension Center, Beijing Anzhen Hospital, Capital Medical University, Beijing Institute of Heart, Lung and Blood Vessel Diseases, Beijing, China., Yan Y; Department of Cardiology, Zhongshan Hospital, Fudan University, Shanghai, China., Lin W; Research Institute of Intelligent Complex Systems, Fudan University, Shanghai, China. wlin@fudan.edu.cn.; State Key Laboratory of Medical Neurobiology and MOE Frontiers Center for Brain Science, Fudan University, Shanghai, China. wlin@fudan.edu.cn., Nie Q; Department of Mathematics, University of California, Irvine, CA, USA. qnie@uci.edu., Shi J; Research Institute of Intelligent Complex Systems, Fudan University, Shanghai, China. jfshi@fudan.edu.cn.; Center for Integrative Spatial-Omics Research, Fudan University, Shanghai, China. jfshi@fudan.edu.cn.; State Key Laboratory of Medical Neurobiology and MOE Frontiers Center for Brain Science, Fudan University, Shanghai, China. jfshi@fudan.edu.cn.
Source: Nature communications [Nat Commun] 2026 Jun 25; Vol. 17 (1). Date of Electronic Publication: 2026 Jun 25.
Publication Type: Journal Article
Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: <searchLink fieldCode="AU" term="%22Tan+Y%22">Tan Y</searchLink>; Research Institute of Intelligent Complex Systems, Fudan University, Shanghai, China.; Institute of Science and Technology for Brain-Inspired Intelligence, Fudan University, Shanghai, China.; Center for Integrative Spatial-Omics Research, Fudan University, Shanghai, China.<br /><searchLink fieldCode="AU" term="%22Wang+Z%22">Wang Z</searchLink>; Research Institute of Intelligent Complex Systems, Fudan University, Shanghai, China.; Shanghai Center for Mathematical Sciences, Fudan University, Shanghai, China.<br /><searchLink fieldCode="AU" term="%22Wang+A%22">Wang A</searchLink>; Department of Cardiology, Zhongshan Hospital, Fudan University, Shanghai, China.; Hypertension Center, Beijing Anzhen Hospital, Capital Medical University, Beijing Institute of Heart, Lung and Blood Vessel Diseases, Beijing, China.<br /><searchLink fieldCode="AU" term="%22Yan+Y%22">Yan Y</searchLink>; Department of Cardiology, Zhongshan Hospital, Fudan University, Shanghai, China.<br /><searchLink fieldCode="AU" term="%22Lin+W%22">Lin W</searchLink>; Research Institute of Intelligent Complex Systems, Fudan University, Shanghai, China. wlin@fudan.edu.cn.; State Key Laboratory of Medical Neurobiology and MOE Frontiers Center for Brain Science, Fudan University, Shanghai, China. wlin@fudan.edu.cn.<br /><searchLink fieldCode="AU" term="%22Nie+Q%22">Nie Q</searchLink>; Department of Mathematics, University of California, Irvine, CA, USA. qnie@uci.edu.<br /><searchLink fieldCode="AU" term="%22Shi+J%22">Shi J</searchLink>; Research Institute of Intelligent Complex Systems, Fudan University, Shanghai, China. jfshi@fudan.edu.cn.; Center for Integrative Spatial-Omics Research, Fudan University, Shanghai, China. jfshi@fudan.edu.cn.; State Key Laboratory of Medical Neurobiology and MOE Frontiers Center for Brain Science, Fudan University, Shanghai, China. jfshi@fudan.edu.cn.
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              Text: 2026 Jun 25
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