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High-accuracy SNV calling for bacterial isolates using deep learning with AccuSNV.

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Title: High-accuracy SNV calling for bacterial isolates using deep learning with AccuSNV.
Authors: Liao H; Massachusetts Institute of Technology., Conwill A; Massachusetts Institute of Technology., Light-Maka I; Max-Planck-Institute for Infection Biology., Fenk M; Max-Planck-Institute for Infection Biology., Mitchell AH; Massachusetts Institute of Technology., Qu EB; Massachusetts Institute of Technology., Torrillo P; Massachusetts Institute of Technology., Baker J; Massachusetts Institute of Technology., Bartsch LR; Max-Planck-Institute for Infection Biology., Key FM; Max-Planck-Institute for Infection Biology., Lieberman TD; Massachusetts Institute of Technology; tami@mit.edu.
Source: Genome research [Genome Res] 2026 Jul 06. Date of Electronic Publication: 2026 Jul 06.
Publication Type: Journal Article
Journal Info: Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9518021 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1549-5469 (Electronic) Linking ISSN: 10889051 NLM ISO Abbreviation: Genome Res Subsets: MEDLINE
Database: MEDLINE Ultimate
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PubType: Academic Journal
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  Data: High-accuracy SNV calling for bacterial isolates using deep learning with AccuSNV.
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  Data: <searchLink fieldCode="AU" term="%22Liao+H%22">Liao H</searchLink>; Massachusetts Institute of Technology.<br /><searchLink fieldCode="AU" term="%22Conwill+A%22">Conwill A</searchLink>; Massachusetts Institute of Technology.<br /><searchLink fieldCode="AU" term="%22Light-Maka+I%22">Light-Maka I</searchLink>; Max-Planck-Institute for Infection Biology.<br /><searchLink fieldCode="AU" term="%22Fenk+M%22">Fenk M</searchLink>; Max-Planck-Institute for Infection Biology.<br /><searchLink fieldCode="AU" term="%22Mitchell+AH%22">Mitchell AH</searchLink>; Massachusetts Institute of Technology.<br /><searchLink fieldCode="AU" term="%22Qu+EB%22">Qu EB</searchLink>; Massachusetts Institute of Technology.<br /><searchLink fieldCode="AU" term="%22Torrillo+P%22">Torrillo P</searchLink>; Massachusetts Institute of Technology.<br /><searchLink fieldCode="AU" term="%22Baker+J%22">Baker J</searchLink>; Massachusetts Institute of Technology.<br /><searchLink fieldCode="AU" term="%22Bartsch+LR%22">Bartsch LR</searchLink>; Max-Planck-Institute for Infection Biology.<br /><searchLink fieldCode="AU" term="%22Key+FM%22">Key FM</searchLink>; Max-Planck-Institute for Infection Biology.<br /><searchLink fieldCode="AU" term="%22Lieberman+TD%22">Lieberman TD</searchLink>; Massachusetts Institute of Technology; tami@mit.edu.
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  Data: <searchLink fieldCode="JN" term="%229518021%22">Genome research</searchLink> [Genome Res] 2026 Jul 06. <i>Date of Electronic Publication: </i>2026 Jul 06.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Cold+Spring+Harbor+Laboratory+Press%22">Cold Spring Harbor Laboratory Press </searchLink><i>Country of Publication: </i>United States <i>NLM ID: </i>9518021 <i>Publication Model: </i>Print-Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>1549-5469 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2210889051%22">10889051 </searchLink><i>NLM ISO Abbreviation: </i>Genome Res <i>Subsets: </i>MEDLINE
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        Value: 10.1101/gr.281341.125
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        Text: English
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      – TitleFull: High-accuracy SNV calling for bacterial isolates using deep learning with AccuSNV.
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            – D: 06
              M: 07
              Text: 2026 Jul 06
              Type: published
              Y: 2026
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              Value: 1549-5469
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