View in EDS PDF Full Text

An Arabidopsis gene regulatory network for secondary cell wall synthesis.

Saved in:
Bibliographic Details
Title: An Arabidopsis gene regulatory network for secondary cell wall synthesis.
Authors: Taylor-Teeples, M., Lin, L., de Lucas, M., Turco, G., Toal, T. W., Gaudinier, A., Young, N. F., Trabucco, G. M., Veling, M. T., Lamothe, R., Handakumbura, P. P., Xiong, G., Wang, C., Corwin, J., Tsoukalas, A., Zhang, L., Ware, D., Pauly, M., Kliebenstein, D. J., Dehesh, K.
Source: Nature. 1/29/2015, Vol. 517 Issue 7536, p571-575. 5p.
Subjects: Arabidopsis thaliana genetics, Gene regulatory networks, Plant cell walls, Genetic transcription in plants, Genetic regulation in plants, Transcription factors, Xylem, Genetic transcription regulation
Abstract: The plant cell wall is an important factor for determining cell shape, function and response to the environment. Secondary cell walls, such as those found in xylem, are composed of cellulose, hemicelluloses and lignin and account for the bulk of plant biomass. The coordination between transcriptional regulation of synthesis for each polymer is complex and vital to cell function. A regulatory hierarchy of developmental switches has been proposed, although the full complement of regulators remains unknown. Here we present a protein-DNA network between Arabidopsis thaliana transcription factors and secondary cell wall metabolic genes with gene expression regulated by a series of feed-forward loops. This model allowed us to develop and validate new hypotheses about secondary wall gene regulation under abiotic stress. Distinct stresses are able to perturb targeted genes to potentially promote functional adaptation. These interactions will serve as a foundation for understanding the regulation of a complex, integral plant component. [ABSTRACT FROM AUTHOR]
Copyright of Nature is the property of Springer Nature and its content may not be copied or emailed to multiple sites without the copyright holder's express written permission. Additionally, content may not be used with any artificial intelligence tools or machine learning technologies. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
Database: Psychology and Behavioral Sciences Collection
FullText Links:
  – Type: pdflink
Text:
  Availability: 0
Header DbId: pbh
DbLabel: Psychology and Behavioral Sciences Collection
An: 100798802
AccessLevel: 6
PubType: Academic Journal
PubTypeId: academicJournal
PreciseRelevancyScore: 0
IllustrationInfo
Items – Name: Title
  Label: Title
  Group: Ti
  Data: An Arabidopsis gene regulatory network for secondary cell wall synthesis.
– Name: Author
  Label: Authors
  Group: Au
  Data: <searchLink fieldCode="AR" term="%22Taylor-Teeples%2C+M%2E%22">Taylor-Teeples, M.</searchLink><br /><searchLink fieldCode="AR" term="%22Lin%2C+L%2E%22">Lin, L.</searchLink><br /><searchLink fieldCode="AR" term="%22de+Lucas%2C+M%2E%22">de Lucas, M.</searchLink><br /><searchLink fieldCode="AR" term="%22Turco%2C+G%2E%22">Turco, G.</searchLink><br /><searchLink fieldCode="AR" term="%22Toal%2C+T%2E+W%2E%22">Toal, T. W.</searchLink><br /><searchLink fieldCode="AR" term="%22Gaudinier%2C+A%2E%22">Gaudinier, A.</searchLink><br /><searchLink fieldCode="AR" term="%22Young%2C+N%2E+F%2E%22">Young, N. F.</searchLink><br /><searchLink fieldCode="AR" term="%22Trabucco%2C+G%2E+M%2E%22">Trabucco, G. M.</searchLink><br /><searchLink fieldCode="AR" term="%22Veling%2C+M%2E+T%2E%22">Veling, M. T.</searchLink><br /><searchLink fieldCode="AR" term="%22Lamothe%2C+R%2E%22">Lamothe, R.</searchLink><br /><searchLink fieldCode="AR" term="%22Handakumbura%2C+P%2E+P%2E%22">Handakumbura, P. P.</searchLink><br /><searchLink fieldCode="AR" term="%22Xiong%2C+G%2E%22">Xiong, G.</searchLink><br /><searchLink fieldCode="AR" term="%22Wang%2C+C%2E%22">Wang, C.</searchLink><br /><searchLink fieldCode="AR" term="%22Corwin%2C+J%2E%22">Corwin, J.</searchLink><br /><searchLink fieldCode="AR" term="%22Tsoukalas%2C+A%2E%22">Tsoukalas, A.</searchLink><br /><searchLink fieldCode="AR" term="%22Zhang%2C+L%2E%22">Zhang, L.</searchLink><br /><searchLink fieldCode="AR" term="%22Ware%2C+D%2E%22">Ware, D.</searchLink><br /><searchLink fieldCode="AR" term="%22Pauly%2C+M%2E%22">Pauly, M.</searchLink><br /><searchLink fieldCode="AR" term="%22Kliebenstein%2C+D%2E+J%2E%22">Kliebenstein, D. J.</searchLink><br /><searchLink fieldCode="AR" term="%22Dehesh%2C+K%2E%22">Dehesh, K.</searchLink>
– Name: TitleSource
  Label: Source
  Group: Src
  Data: <searchLink fieldCode="JN" term="%22Nature%22">Nature</searchLink>. 1/29/2015, Vol. 517 Issue 7536, p571-575. 5p.
– Name: Subject
  Label: Subjects
  Group: Su
  Data: <searchLink fieldCode="DE" term="%22Arabidopsis+thaliana+genetics%22">Arabidopsis thaliana genetics</searchLink><br /><searchLink fieldCode="DE" term="%22Gene+regulatory+networks%22">Gene regulatory networks</searchLink><br /><searchLink fieldCode="DE" term="%22Plant+cell+walls%22">Plant cell walls</searchLink><br /><searchLink fieldCode="DE" term="%22Genetic+transcription+in+plants%22">Genetic transcription in plants</searchLink><br /><searchLink fieldCode="DE" term="%22Genetic+regulation+in+plants%22">Genetic regulation in plants</searchLink><br /><searchLink fieldCode="DE" term="%22Transcription+factors%22">Transcription factors</searchLink><br /><searchLink fieldCode="DE" term="%22Xylem%22">Xylem</searchLink><br /><searchLink fieldCode="DE" term="%22Genetic+transcription+regulation%22">Genetic transcription regulation</searchLink>
– Name: Abstract
  Label: Abstract
  Group: Ab
  Data: The plant cell wall is an important factor for determining cell shape, function and response to the environment. Secondary cell walls, such as those found in xylem, are composed of cellulose, hemicelluloses and lignin and account for the bulk of plant biomass. The coordination between transcriptional regulation of synthesis for each polymer is complex and vital to cell function. A regulatory hierarchy of developmental switches has been proposed, although the full complement of regulators remains unknown. Here we present a protein-DNA network between Arabidopsis thaliana transcription factors and secondary cell wall metabolic genes with gene expression regulated by a series of feed-forward loops. This model allowed us to develop and validate new hypotheses about secondary wall gene regulation under abiotic stress. Distinct stresses are able to perturb targeted genes to potentially promote functional adaptation. These interactions will serve as a foundation for understanding the regulation of a complex, integral plant component. [ABSTRACT FROM AUTHOR]
– Name: AbstractSuppliedCopyright
  Label:
  Group: Ab
  Data: <i>Copyright of Nature is the property of Springer Nature and its content may not be copied or emailed to multiple sites without the copyright holder's express written permission. Additionally, content may not be used with any artificial intelligence tools or machine learning technologies. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract.</i> (Copyright applies to all Abstracts.)
PLink https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=pbh&AN=100798802
RecordInfo BibRecord:
  BibEntity:
    Identifiers:
      – Type: doi
        Value: 10.1038/nature14099
    Languages:
      – Code: eng
        Text: English
    PhysicalDescription:
      Pagination:
        PageCount: 5
        StartPage: 571
    Subjects:
      – SubjectFull: Arabidopsis thaliana genetics
        Type: general
      – SubjectFull: Gene regulatory networks
        Type: general
      – SubjectFull: Plant cell walls
        Type: general
      – SubjectFull: Genetic transcription in plants
        Type: general
      – SubjectFull: Genetic regulation in plants
        Type: general
      – SubjectFull: Transcription factors
        Type: general
      – SubjectFull: Xylem
        Type: general
      – SubjectFull: Genetic transcription regulation
        Type: general
    Titles:
      – TitleFull: An Arabidopsis gene regulatory network for secondary cell wall synthesis.
        Type: main
  BibRelationships:
    HasContributorRelationships:
      – PersonEntity:
          Name:
            NameFull: Taylor-Teeples, M.
      – PersonEntity:
          Name:
            NameFull: Lin, L.
      – PersonEntity:
          Name:
            NameFull: de Lucas, M.
      – PersonEntity:
          Name:
            NameFull: Turco, G.
      – PersonEntity:
          Name:
            NameFull: Toal, T. W.
      – PersonEntity:
          Name:
            NameFull: Gaudinier, A.
      – PersonEntity:
          Name:
            NameFull: Young, N. F.
      – PersonEntity:
          Name:
            NameFull: Trabucco, G. M.
      – PersonEntity:
          Name:
            NameFull: Veling, M. T.
      – PersonEntity:
          Name:
            NameFull: Lamothe, R.
      – PersonEntity:
          Name:
            NameFull: Handakumbura, P. P.
      – PersonEntity:
          Name:
            NameFull: Xiong, G.
      – PersonEntity:
          Name:
            NameFull: Wang, C.
      – PersonEntity:
          Name:
            NameFull: Corwin, J.
      – PersonEntity:
          Name:
            NameFull: Tsoukalas, A.
      – PersonEntity:
          Name:
            NameFull: Zhang, L.
      – PersonEntity:
          Name:
            NameFull: Ware, D.
      – PersonEntity:
          Name:
            NameFull: Pauly, M.
      – PersonEntity:
          Name:
            NameFull: Kliebenstein, D. J.
      – PersonEntity:
          Name:
            NameFull: Dehesh, K.
    IsPartOfRelationships:
      – BibEntity:
          Dates:
            – D: 29
              M: 01
              Text: 1/29/2015
              Type: published
              Y: 2015
          Identifiers:
            – Type: issn-print
              Value: 00280836
          Numbering:
            – Type: volume
              Value: 517
            – Type: issue
              Value: 7536
          Titles:
            – TitleFull: Nature
              Type: main
ResultId 1