View in EDS PDF Full Text

Patterns and ecological drivers of ocean viral communities.

Saved in:
Bibliographic Details
Title: Patterns and ecological drivers of ocean viral communities.
Authors: Brum, Jennifer R., Ignacio-Espinoza, J. Cesar, Roux, Simon, Doulcier, Guilhem, Acinas, Silvia G., Alberti, Adriana, Chaffron, Samuel, Cruaud, Corinne, de Vargas, Colomban, Gasol, Josep M., Gorsky, Gabriel, Gregory, Ann C., Guidi, Lionel, Hingamp, Pascal, Iudicone, Daniele, Not, Fabrice, Ogata, Hiroyuki, Pesant, Stéphane, Poulos, Bonnie T., Schwenck, Sarah M.
Source: Science (pre-March 2025). 5/22/2015, Vol. 348 Issue 6237, p1261498-1-1261498-10. 10p.
Subjects: Viruses, Marine ecology, Microorganism populations, Gene flow, DNA, Viral proteins, Biogeography, Aquatic biodiversity
Abstract: Viruses influence ecosystems by modulating microbial population size, diversity, metabolic outputs, and gene flow. Here, we use quantitative double-stranded DNA (dsDNA) viral-fraction metagenomes (viromes) and whole viral community morphological data sets from 43 Tara Oceans expedition samples to assess viral community patterns and structure in the upper ocean. Protein cluster cataloging defined pelagic upper-ocean viral community pan and core gene sets and suggested that this sequence space is well-sampled. Analyses of viral protein clusters, populations, and morphology revealed biogeographic patterns whereby viral communities were passively transported on oceanic currents and locally structured by environmental conditions that affect host community structure. Together, these investigations establish a global ocean dsDNA viromic data set with analyses supporting the seed-bank hypothesis to explain how oceanic viral communities maintain high local diversity. [ABSTRACT FROM AUTHOR]
Copyright of Science (pre-March 2025) is the property of American Association for the Advancement of Science and its content may not be copied or emailed to multiple sites without the copyright holder's express written permission. Additionally, content may not be used with any artificial intelligence tools or machine learning technologies. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
Database: Psychology and Behavioral Sciences Collection
FullText Links:
  – Type: pdflink
Text:
  Availability: 0
Header DbId: pbh
DbLabel: Psychology and Behavioral Sciences Collection
An: 102820253
AccessLevel: 6
PubType: Academic Journal
PubTypeId: academicJournal
PreciseRelevancyScore: 0
IllustrationInfo
Items – Name: Title
  Label: Title
  Group: Ti
  Data: Patterns and ecological drivers of ocean viral communities.
– Name: Author
  Label: Authors
  Group: Au
  Data: <searchLink fieldCode="AR" term="%22Brum%2C+Jennifer+R%2E%22">Brum, Jennifer R.</searchLink><br /><searchLink fieldCode="AR" term="%22Ignacio-Espinoza%2C+J%2E+Cesar%22">Ignacio-Espinoza, J. Cesar</searchLink><br /><searchLink fieldCode="AR" term="%22Roux%2C+Simon%22">Roux, Simon</searchLink><br /><searchLink fieldCode="AR" term="%22Doulcier%2C+Guilhem%22">Doulcier, Guilhem</searchLink><br /><searchLink fieldCode="AR" term="%22Acinas%2C+Silvia+G%2E%22">Acinas, Silvia G.</searchLink><br /><searchLink fieldCode="AR" term="%22Alberti%2C+Adriana%22">Alberti, Adriana</searchLink><br /><searchLink fieldCode="AR" term="%22Chaffron%2C+Samuel%22">Chaffron, Samuel</searchLink><br /><searchLink fieldCode="AR" term="%22Cruaud%2C+Corinne%22">Cruaud, Corinne</searchLink><br /><searchLink fieldCode="AR" term="%22de+Vargas%2C+Colomban%22">de Vargas, Colomban</searchLink><br /><searchLink fieldCode="AR" term="%22Gasol%2C+Josep+M%2E%22">Gasol, Josep M.</searchLink><br /><searchLink fieldCode="AR" term="%22Gorsky%2C+Gabriel%22">Gorsky, Gabriel</searchLink><br /><searchLink fieldCode="AR" term="%22Gregory%2C+Ann+C%2E%22">Gregory, Ann C.</searchLink><br /><searchLink fieldCode="AR" term="%22Guidi%2C+Lionel%22">Guidi, Lionel</searchLink><br /><searchLink fieldCode="AR" term="%22Hingamp%2C+Pascal%22">Hingamp, Pascal</searchLink><br /><searchLink fieldCode="AR" term="%22Iudicone%2C+Daniele%22">Iudicone, Daniele</searchLink><br /><searchLink fieldCode="AR" term="%22Not%2C+Fabrice%22">Not, Fabrice</searchLink><br /><searchLink fieldCode="AR" term="%22Ogata%2C+Hiroyuki%22">Ogata, Hiroyuki</searchLink><br /><searchLink fieldCode="AR" term="%22Pesant%2C+Stéphane%22">Pesant, Stéphane</searchLink><br /><searchLink fieldCode="AR" term="%22Poulos%2C+Bonnie+T%2E%22">Poulos, Bonnie T.</searchLink><br /><searchLink fieldCode="AR" term="%22Schwenck%2C+Sarah+M%2E%22">Schwenck, Sarah M.</searchLink>
– Name: TitleSource
  Label: Source
  Group: Src
  Data: <searchLink fieldCode="JN" term="%22Science+%28pre-March+2025%29%22">Science (pre-March 2025)</searchLink>. 5/22/2015, Vol. 348 Issue 6237, p1261498-1-1261498-10. 10p.
– Name: Subject
  Label: Subjects
  Group: Su
  Data: <searchLink fieldCode="DE" term="%22Viruses%22">Viruses</searchLink><br /><searchLink fieldCode="DE" term="%22Marine+ecology%22">Marine ecology</searchLink><br /><searchLink fieldCode="DE" term="%22Microorganism+populations%22">Microorganism populations</searchLink><br /><searchLink fieldCode="DE" term="%22Gene+flow%22">Gene flow</searchLink><br /><searchLink fieldCode="DE" term="%22DNA%22">DNA</searchLink><br /><searchLink fieldCode="DE" term="%22Viral+proteins%22">Viral proteins</searchLink><br /><searchLink fieldCode="DE" term="%22Biogeography%22">Biogeography</searchLink><br /><searchLink fieldCode="DE" term="%22Aquatic+biodiversity%22">Aquatic biodiversity</searchLink>
– Name: Abstract
  Label: Abstract
  Group: Ab
  Data: Viruses influence ecosystems by modulating microbial population size, diversity, metabolic outputs, and gene flow. Here, we use quantitative double-stranded DNA (dsDNA) viral-fraction metagenomes (viromes) and whole viral community morphological data sets from 43 Tara Oceans expedition samples to assess viral community patterns and structure in the upper ocean. Protein cluster cataloging defined pelagic upper-ocean viral community pan and core gene sets and suggested that this sequence space is well-sampled. Analyses of viral protein clusters, populations, and morphology revealed biogeographic patterns whereby viral communities were passively transported on oceanic currents and locally structured by environmental conditions that affect host community structure. Together, these investigations establish a global ocean dsDNA viromic data set with analyses supporting the seed-bank hypothesis to explain how oceanic viral communities maintain high local diversity. [ABSTRACT FROM AUTHOR]
– Name: AbstractSuppliedCopyright
  Label:
  Group: Ab
  Data: <i>Copyright of Science (pre-March 2025) is the property of American Association for the Advancement of Science and its content may not be copied or emailed to multiple sites without the copyright holder's express written permission. Additionally, content may not be used with any artificial intelligence tools or machine learning technologies. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract.</i> (Copyright applies to all Abstracts.)
PLink https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=pbh&AN=102820253
RecordInfo BibRecord:
  BibEntity:
    Identifiers:
      – Type: doi
        Value: 10.1126/science.1261498
    Languages:
      – Code: eng
        Text: English
    PhysicalDescription:
      Pagination:
        PageCount: 10
        StartPage: 1261498-1
    Subjects:
      – SubjectFull: Viruses
        Type: general
      – SubjectFull: Marine ecology
        Type: general
      – SubjectFull: Microorganism populations
        Type: general
      – SubjectFull: Gene flow
        Type: general
      – SubjectFull: DNA
        Type: general
      – SubjectFull: Viral proteins
        Type: general
      – SubjectFull: Biogeography
        Type: general
      – SubjectFull: Aquatic biodiversity
        Type: general
    Titles:
      – TitleFull: Patterns and ecological drivers of ocean viral communities.
        Type: main
  BibRelationships:
    HasContributorRelationships:
      – PersonEntity:
          Name:
            NameFull: Brum, Jennifer R.
      – PersonEntity:
          Name:
            NameFull: Ignacio-Espinoza, J. Cesar
      – PersonEntity:
          Name:
            NameFull: Roux, Simon
      – PersonEntity:
          Name:
            NameFull: Doulcier, Guilhem
      – PersonEntity:
          Name:
            NameFull: Acinas, Silvia G.
      – PersonEntity:
          Name:
            NameFull: Alberti, Adriana
      – PersonEntity:
          Name:
            NameFull: Chaffron, Samuel
      – PersonEntity:
          Name:
            NameFull: Cruaud, Corinne
      – PersonEntity:
          Name:
            NameFull: de Vargas, Colomban
      – PersonEntity:
          Name:
            NameFull: Gasol, Josep M.
      – PersonEntity:
          Name:
            NameFull: Gorsky, Gabriel
      – PersonEntity:
          Name:
            NameFull: Gregory, Ann C.
      – PersonEntity:
          Name:
            NameFull: Guidi, Lionel
      – PersonEntity:
          Name:
            NameFull: Hingamp, Pascal
      – PersonEntity:
          Name:
            NameFull: Iudicone, Daniele
      – PersonEntity:
          Name:
            NameFull: Not, Fabrice
      – PersonEntity:
          Name:
            NameFull: Ogata, Hiroyuki
      – PersonEntity:
          Name:
            NameFull: Pesant, Stéphane
      – PersonEntity:
          Name:
            NameFull: Poulos, Bonnie T.
      – PersonEntity:
          Name:
            NameFull: Schwenck, Sarah M.
    IsPartOfRelationships:
      – BibEntity:
          Dates:
            – D: 22
              M: 05
              Text: 5/22/2015
              Type: published
              Y: 2015
          Identifiers:
            – Type: issn-print
              Value: 00368075
          Numbering:
            – Type: volume
              Value: 348
            – Type: issue
              Value: 6237
          Titles:
            – TitleFull: Science (pre-March 2025)
              Type: main
ResultId 1