Natural selection shaped the rise and fall of passenger pigeon genomic diversity.

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Title: Natural selection shaped the rise and fall of passenger pigeon genomic diversity. (cover story)
Authors: Murray, Gemma G. R., Soares, André E. R., Novak, Ben J., Schaefer, Nathan K., Cahill, James A., Baker, Allan J., Demboski, John R., Doll, Andrew, Da Fonseca, Rute R., Fulton, Tara L., Gilbert, M. Thomas P., Heintzman, Peter D., Letts, Brandon, McIntosh, George, O’Connell, Brendan L., Peck, Mark, Pipes, Marie-Lorraine, Rice, Edward S., Santos, Kathryn M., Gregory Sohrweide, A.
Source: Science (pre-March 2025). 11/17/2017, Vol. 358 Issue 6365, p951-954. 4p. 3 Color Photographs, 1 Graph.
Subjects: Bird evolution, Passenger pigeon, Comparative genomics, Natural selection, Behavior evolution, Birds
Abstract: The extinct passenger pigeon was once the most abundant bird in North America, and possibly the world. Although theory predicts that large populations will be more genetically diverse, passenger pigeon genetic diversity was surprisingly low. To investigate this disconnect, we analyzed 41 mitochondrial and 4 nuclear genomes from passenger pigeons and 2 genomes from band-tailed pigeons, which are passenger pigeons’ closest living relatives. Passenger pigeons’ large population size appears to have allowed for faster adaptive evolution and removal of harmful mutations, driving a huge loss in their neutral genetic diversity. These results demonstrate the effect that selection can have on a vertebrate genome and contradict results that suggested that population instability contributed to this species’s surprisingly rapid extinction. [ABSTRACT FROM AUTHOR]
Copyright of Science (pre-March 2025) is the property of American Association for the Advancement of Science and its content may not be copied or emailed to multiple sites without the copyright holder's express written permission. Additionally, content may not be used with any artificial intelligence tools or machine learning technologies. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
Database: Psychology and Behavioral Sciences Collection
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  Data: Natural selection shaped the rise and fall of passenger pigeon genomic diversity. (cover story)
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  Data: <searchLink fieldCode="AR" term="%22Murray%2C+Gemma+G%2E+R%2E%22">Murray, Gemma G. R.</searchLink><br /><searchLink fieldCode="AR" term="%22Soares%2C+André+E%2E+R%2E%22">Soares, André E. R.</searchLink><br /><searchLink fieldCode="AR" term="%22Novak%2C+Ben+J%2E%22">Novak, Ben J.</searchLink><br /><searchLink fieldCode="AR" term="%22Schaefer%2C+Nathan+K%2E%22">Schaefer, Nathan K.</searchLink><br /><searchLink fieldCode="AR" term="%22Cahill%2C+James+A%2E%22">Cahill, James A.</searchLink><br /><searchLink fieldCode="AR" term="%22Baker%2C+Allan+J%2E%22">Baker, Allan J.</searchLink><br /><searchLink fieldCode="AR" term="%22Demboski%2C+John+R%2E%22">Demboski, John R.</searchLink><br /><searchLink fieldCode="AR" term="%22Doll%2C+Andrew%22">Doll, Andrew</searchLink><br /><searchLink fieldCode="AR" term="%22Da+Fonseca%2C+Rute+R%2E%22">Da Fonseca, Rute R.</searchLink><br /><searchLink fieldCode="AR" term="%22Fulton%2C+Tara+L%2E%22">Fulton, Tara L.</searchLink><br /><searchLink fieldCode="AR" term="%22Gilbert%2C+M%2E+Thomas+P%2E%22">Gilbert, M. Thomas P.</searchLink><br /><searchLink fieldCode="AR" term="%22Heintzman%2C+Peter+D%2E%22">Heintzman, Peter D.</searchLink><br /><searchLink fieldCode="AR" term="%22Letts%2C+Brandon%22">Letts, Brandon</searchLink><br /><searchLink fieldCode="AR" term="%22McIntosh%2C+George%22">McIntosh, George</searchLink><br /><searchLink fieldCode="AR" term="%22O’Connell%2C+Brendan+L%2E%22">O’Connell, Brendan L.</searchLink><br /><searchLink fieldCode="AR" term="%22Peck%2C+Mark%22">Peck, Mark</searchLink><br /><searchLink fieldCode="AR" term="%22Pipes%2C+Marie-Lorraine%22">Pipes, Marie-Lorraine</searchLink><br /><searchLink fieldCode="AR" term="%22Rice%2C+Edward+S%2E%22">Rice, Edward S.</searchLink><br /><searchLink fieldCode="AR" term="%22Santos%2C+Kathryn+M%2E%22">Santos, Kathryn M.</searchLink><br /><searchLink fieldCode="AR" term="%22Gregory+Sohrweide%2C+A%2E%22">Gregory Sohrweide, A.</searchLink>
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  Data: <searchLink fieldCode="JN" term="%22Science+%28pre-March+2025%29%22">Science (pre-March 2025)</searchLink>. 11/17/2017, Vol. 358 Issue 6365, p951-954. 4p. 3 Color Photographs, 1 Graph.
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  Data: <searchLink fieldCode="DE" term="%22Bird+evolution%22">Bird evolution</searchLink><br /><searchLink fieldCode="DE" term="%22Passenger+pigeon%22">Passenger pigeon</searchLink><br /><searchLink fieldCode="DE" term="%22Comparative+genomics%22">Comparative genomics</searchLink><br /><searchLink fieldCode="DE" term="%22Natural+selection%22">Natural selection</searchLink><br /><searchLink fieldCode="DE" term="%22Behavior+evolution%22">Behavior evolution</searchLink><br /><searchLink fieldCode="DE" term="%22Birds%22">Birds</searchLink>
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  Label: Abstract
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  Data: The extinct passenger pigeon was once the most abundant bird in North America, and possibly the world. Although theory predicts that large populations will be more genetically diverse, passenger pigeon genetic diversity was surprisingly low. To investigate this disconnect, we analyzed 41 mitochondrial and 4 nuclear genomes from passenger pigeons and 2 genomes from band-tailed pigeons, which are passenger pigeons’ closest living relatives. Passenger pigeons’ large population size appears to have allowed for faster adaptive evolution and removal of harmful mutations, driving a huge loss in their neutral genetic diversity. These results demonstrate the effect that selection can have on a vertebrate genome and contradict results that suggested that population instability contributed to this species’s surprisingly rapid extinction. [ABSTRACT FROM AUTHOR]
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  Data: <i>Copyright of Science (pre-March 2025) is the property of American Association for the Advancement of Science and its content may not be copied or emailed to multiple sites without the copyright holder's express written permission. Additionally, content may not be used with any artificial intelligence tools or machine learning technologies. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract.</i> (Copyright applies to all Abstracts.)
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