PHYLOGENETIC POSITION OF THE NEW WORLD QUAIL (ODONTOPHORIDAE): EIGHT NUCLEAR LOCI AND THREE MITOCHONDRIAL REGIONS CONTRADICT MORPHOLOGY AND THE SIBLEY-AHLQUIST TAPESTRY.
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| Title: | PHYLOGENETIC POSITION OF THE NEW WORLD QUAIL (ODONTOPHORIDAE): EIGHT NUCLEAR LOCI AND THREE MITOCHONDRIAL REGIONS CONTRADICT MORPHOLOGY AND THE SIBLEY-AHLQUIST TAPESTRY. |
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| Alternate Title: | Posición Filogenética de las Codornices del Nuevo Mundo (Odontophoridae): Ocho Loci Nucleares y Tres Regiones Mitocondriales Contradicen la Morfología y la Filogenia de Sibley y Ahlquist. |
| Authors: | Cox, W. Andrew, Kimball, Rebecca T., Braun, Edward L. |
| Source: | Auk (American Ornithologists Union). Jan2007, Vol. 124 Issue 1, p71-84. 14p. |
| Subjects: | Quails, Galliformes, Guineafowl, Nucleotide sequence, Phasianidae |
| Abstract (English): | The evolutionary relationship between the New World quail (Odontophoridae) and other groups of Galliformes has been an area of debate. In particular, the relationship between the New World quail and guineafowl (Numidinae) has been difficult to resolve. We analyzed >8 kb of DNA sequence data from 16 taxa that represent all major lineages of Galliformes to resolve the phylogenetic position of New World quail. A combined data set of eight nuclear loci and three mitochondrial regions analyzed with maximum parsimony, maximum likelihood, and Bayesian methods provide congruent and strong support for New World quail being basal members of a phasianid clade that excludes guineafowl. By contrast, the three mitochondrial regions exhibit modest incongruence with each other. This is reflected in the combined mitochondrial analyses that weakly support the Sibley-Ahlquist topology that placed the New World quail basal in relation to guineafowl and led to the placement of New World quail in its own family, sister to the Phasianidae. However, simulation-based topology tests using the mitochondrial data were unable to reject the topology suggested by our combined (mitochondrial and nuclear) data set. By contrast, similar tests using our most likely topology and our combined nuclear and mitochondrial data allow us to strongly reject the Sibley-Ahlquist topology and a topology based on morphological data that unites Old and New World quail. [ABSTRACT FROM AUTHOR] |
| Abstract (Spanish): | La relación evolutiva entre las codornices del Nuevo Mundo (Odontophoridae) y otros grupos de Galliformes ha sido un área de debate. En particular, la relación entre Odontophoridae y Numidinae ha resultado difícil de resolver. Analizamos >8 kb de datos de secuencias de ADN de 16 taxa que representan todos los linajes principales de Galliformes para resolver la posición filogenética de Odontophoridae. Un conjunto de datos combinado de ocho loci nucleares y tres regiones mitocondriales analizado con métodos de máxima parsimonia, de máxima verosimilitud y Bayesianos apoya fuertemente la posición basal de Odontophoridae en un clado de fasiánidos que no incluye a los Numidinae. En contraste, las tres regiones mitocondriales presentan incongruencias modestas entre sí. Esto se refleja en los análisis de datos mitocondriales combinados, los cuales apoyan débilmente la topología de Sibley y Ahlquist, en la que Odontophoridae ocupaba una posición basal con respecto a Numidinae y llevó a la decisión de reconocer a Odontophoridae como una familia aparte, hermana de Phasianidae. Sin embargo, pruebas de topología basadas en simulaciones hechas empleando los datos mitocondriales no pudieron rechazar la topología sugerida por nuestro conjunto de datos mitocondriales y nucleares combinados. En cambio, pruebas similares hechas utilizando nuestra topología más verosímil y nuestros datos nucleares y mitocondriales combinados nos permitieron rechazar fuertemente la topología de Sibley y Ahlquist y una topologia basada en datos morfológicos que agrupa alas codornices del Viejo y del Nuevo Mundo. [ABSTRACT FROM AUTHOR] |
| Copyright of Auk (American Ornithologists Union) is the property of American Ornithologists Union and its content may not be copied or emailed to multiple sites without the copyright holder's express written permission. Additionally, content may not be used with any artificial intelligence tools or machine learning technologies. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.) | |
| Database: | Psychology and Behavioral Sciences Collection |
| FullText | Links: – Type: pdflink Text: Availability: 0 |
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| Header | DbId: pbh DbLabel: Psychology and Behavioral Sciences Collection An: 24052542 AccessLevel: 6 PubType: Academic Journal PubTypeId: academicJournal PreciseRelevancyScore: 0 |
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| Items | – Name: Title Label: Title Group: Ti Data: PHYLOGENETIC POSITION OF THE NEW WORLD QUAIL (ODONTOPHORIDAE): EIGHT NUCLEAR LOCI AND THREE MITOCHONDRIAL REGIONS CONTRADICT MORPHOLOGY AND THE SIBLEY-AHLQUIST TAPESTRY. – Name: TitleAlt Label: Alternate Title Group: TiAlt Data: Posición Filogenética de las Codornices del Nuevo Mundo (Odontophoridae): Ocho Loci Nucleares y Tres Regiones Mitocondriales Contradicen la Morfología y la Filogenia de Sibley y Ahlquist. – Name: Author Label: Authors Group: Au Data: <searchLink fieldCode="AR" term="%22Cox%2C+W%2E+Andrew%22">Cox, W. Andrew</searchLink><br /><searchLink fieldCode="AR" term="%22Kimball%2C+Rebecca+T%2E%22">Kimball, Rebecca T.</searchLink><br /><searchLink fieldCode="AR" term="%22Braun%2C+Edward+L%2E%22">Braun, Edward L.</searchLink> – Name: TitleSource Label: Source Group: Src Data: <searchLink fieldCode="JN" term="%22Auk+%28American+Ornithologists+Union%29%22">Auk (American Ornithologists Union)</searchLink>. Jan2007, Vol. 124 Issue 1, p71-84. 14p. – Name: Subject Label: Subjects Group: Su Data: <searchLink fieldCode="DE" term="%22Quails%22">Quails</searchLink><br /><searchLink fieldCode="DE" term="%22Galliformes%22">Galliformes</searchLink><br /><searchLink fieldCode="DE" term="%22Guineafowl%22">Guineafowl</searchLink><br /><searchLink fieldCode="DE" term="%22Nucleotide+sequence%22">Nucleotide sequence</searchLink><br /><searchLink fieldCode="DE" term="%22Phasianidae%22">Phasianidae</searchLink> – Name: Abstract Label: Abstract (English) Group: Ab Data: The evolutionary relationship between the New World quail (Odontophoridae) and other groups of Galliformes has been an area of debate. In particular, the relationship between the New World quail and guineafowl (Numidinae) has been difficult to resolve. We analyzed >8 kb of DNA sequence data from 16 taxa that represent all major lineages of Galliformes to resolve the phylogenetic position of New World quail. A combined data set of eight nuclear loci and three mitochondrial regions analyzed with maximum parsimony, maximum likelihood, and Bayesian methods provide congruent and strong support for New World quail being basal members of a phasianid clade that excludes guineafowl. By contrast, the three mitochondrial regions exhibit modest incongruence with each other. This is reflected in the combined mitochondrial analyses that weakly support the Sibley-Ahlquist topology that placed the New World quail basal in relation to guineafowl and led to the placement of New World quail in its own family, sister to the Phasianidae. However, simulation-based topology tests using the mitochondrial data were unable to reject the topology suggested by our combined (mitochondrial and nuclear) data set. By contrast, similar tests using our most likely topology and our combined nuclear and mitochondrial data allow us to strongly reject the Sibley-Ahlquist topology and a topology based on morphological data that unites Old and New World quail. [ABSTRACT FROM AUTHOR] – Name: Abstract Label: Abstract (Spanish) Group: Ab Data: La relación evolutiva entre las codornices del Nuevo Mundo (Odontophoridae) y otros grupos de Galliformes ha sido un área de debate. En particular, la relación entre Odontophoridae y Numidinae ha resultado difícil de resolver. Analizamos >8 kb de datos de secuencias de ADN de 16 taxa que representan todos los linajes principales de Galliformes para resolver la posición filogenética de Odontophoridae. Un conjunto de datos combinado de ocho loci nucleares y tres regiones mitocondriales analizado con métodos de máxima parsimonia, de máxima verosimilitud y Bayesianos apoya fuertemente la posición basal de Odontophoridae en un clado de fasiánidos que no incluye a los Numidinae. En contraste, las tres regiones mitocondriales presentan incongruencias modestas entre sí. Esto se refleja en los análisis de datos mitocondriales combinados, los cuales apoyan débilmente la topología de Sibley y Ahlquist, en la que Odontophoridae ocupaba una posición basal con respecto a Numidinae y llevó a la decisión de reconocer a Odontophoridae como una familia aparte, hermana de Phasianidae. Sin embargo, pruebas de topología basadas en simulaciones hechas empleando los datos mitocondriales no pudieron rechazar la topología sugerida por nuestro conjunto de datos mitocondriales y nucleares combinados. En cambio, pruebas similares hechas utilizando nuestra topología más verosímil y nuestros datos nucleares y mitocondriales combinados nos permitieron rechazar fuertemente la topología de Sibley y Ahlquist y una topologia basada en datos morfológicos que agrupa alas codornices del Viejo y del Nuevo Mundo. [ABSTRACT FROM AUTHOR] – Name: AbstractSuppliedCopyright Label: Group: Ab Data: <i>Copyright of Auk (American Ornithologists Union) is the property of American Ornithologists Union and its content may not be copied or emailed to multiple sites without the copyright holder's express written permission. Additionally, content may not be used with any artificial intelligence tools or machine learning technologies. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract.</i> (Copyright applies to all Abstracts.) |
| PLink | https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=pbh&AN=24052542 |
| RecordInfo | BibRecord: BibEntity: Identifiers: – Type: doi Value: 10.1642/0004-8038(2007)124[71:PPOTNW]2.0.CO;2 Languages: – Code: eng Text: English PhysicalDescription: Pagination: PageCount: 14 StartPage: 71 Subjects: – SubjectFull: Quails Type: general – SubjectFull: Galliformes Type: general – SubjectFull: Guineafowl Type: general – SubjectFull: Nucleotide sequence Type: general – SubjectFull: Phasianidae Type: general Titles: – TitleFull: PHYLOGENETIC POSITION OF THE NEW WORLD QUAIL (ODONTOPHORIDAE): EIGHT NUCLEAR LOCI AND THREE MITOCHONDRIAL REGIONS CONTRADICT MORPHOLOGY AND THE SIBLEY-AHLQUIST TAPESTRY. Type: main BibRelationships: HasContributorRelationships: – PersonEntity: Name: NameFull: Cox, W. Andrew – PersonEntity: Name: NameFull: Kimball, Rebecca T. – PersonEntity: Name: NameFull: Braun, Edward L. IsPartOfRelationships: – BibEntity: Dates: – D: 01 M: 01 Text: Jan2007 Type: published Y: 2007 Identifiers: – Type: issn-print Value: 00048038 Numbering: – Type: volume Value: 124 – Type: issue Value: 1 Titles: – TitleFull: Auk (American Ornithologists Union) Type: main |
| ResultId | 1 |
