Algorithms and Lower Bounds for Ordering Problems on Strings

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Bibliographic Details
Title: Algorithms and Lower Bounds for Ordering Problems on Strings
Authors: Gibney, Daniel
Committee Members: Valliyil Thankachan, Sharma
Summary: This dissertation presents novel algorithms and conditional lower bounds for a collection of string and text-compression-related problems. These results are unified under the theme of ordering constraint satisfaction. Utilizing the connections to ordering constraint satisfaction, we provide hardness results and algorithms for the following: recognizing a type of labeled graph amenable to text-indexing known as Wheeler graphs, minimizing the number of maximal unary substrings occurring in the Burrows-Wheeler Transformation of a text, minimizing the number of factors occurring in the Lyndon factorization of a text, and finding an optimal reference string for relative Lempel-Ziv encoding.
URL: https://stars.library.ucf.edu/etd2020/507
Database: OpenDissertations
Description
Abstract:This dissertation presents novel algorithms and conditional lower bounds for a collection of string and text-compression-related problems. These results are unified under the theme of ordering constraint satisfaction. Utilizing the connections to ordering constraint satisfaction, we provide hardness results and algorithms for the following: recognizing a type of labeled graph amenable to text-indexing known as Wheeler graphs, minimizing the number of maximal unary substrings occurring in the Burrows-Wheeler Transformation of a text, minimizing the number of factors occurring in the Lyndon factorization of a text, and finding an optimal reference string for relative Lempel-Ziv encoding.