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Transcriptome sequencing reveals potential mechanism of cryptic 3' splice site selection in SF3B1-mutated cancers.

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Title: Transcriptome sequencing reveals potential mechanism of cryptic 3' splice site selection in SF3B1-mutated cancers.
Authors: DeBoever C; Bioinformatics and Systems Biology, University of California San Diego, La Jolla, California, United States of America., Ghia EM; Moores Cancer Center, University of California San Diego, La Jolla, California, United States of America., Shepard PJ; Moores Cancer Center, University of California San Diego, La Jolla, California, United States of America; Department of Pediatrics and Rady Children's Hospital, University of California San Diego, La Jolla, California, United States of America., Rassenti L; Moores Cancer Center, University of California San Diego, La Jolla, California, United States of America., Barrett CL; Moores Cancer Center, University of California San Diego, La Jolla, California, United States of America; Department of Pediatrics and Rady Children's Hospital, University of California San Diego, La Jolla, California, United States of America; Institute for Genomic Medicine, University of California San Diego, La Jolla, California, United States of America., Jepsen K; Institute for Genomic Medicine, University of California San Diego, La Jolla, California, United States of America., Jamieson CH; Moores Cancer Center, University of California San Diego, La Jolla, California, United States of America; Department of Medicine, University of California San Diego, La Jolla, California, United States of America; Sanford Consortium for Regenerative Medicine, University of California San Diego, La Jolla, California, United States of America., Carson D; Moores Cancer Center, University of California San Diego, La Jolla, California, United States of America; Department of Medicine, University of California San Diego, La Jolla, California, United States of America; Sanford Consortium for Regenerative Medicine, University of California San Diego, La Jolla, California, United States of America., Kipps TJ; Moores Cancer Center, University of California San Diego, La Jolla, California, United States of America., Frazer KA; Moores Cancer Center, University of California San Diego, La Jolla, California, United States of America; Department of Pediatrics and Rady Children's Hospital, University of California San Diego, La Jolla, California, United States of America; Institute for Genomic Medicine, University of California San Diego, La Jolla, California, United States of America.
Source: PLoS computational biology [PLoS Comput Biol] 2015 Mar 13; Vol. 11 (3), pp. e1004105. Date of Electronic Publication: 2015 Mar 13 (Print Publication: 2015).
Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Transcriptome sequencing reveals potential mechanism of cryptic 3' splice site selection in SF3B1-mutated cancers.
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  Data: <searchLink fieldCode="AU" term="%22DeBoever+C%22">DeBoever C</searchLink>; Bioinformatics and Systems Biology, University of California San Diego, La Jolla, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Ghia+EM%22">Ghia EM</searchLink>; Moores Cancer Center, University of California San Diego, La Jolla, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Shepard+PJ%22">Shepard PJ</searchLink>; Moores Cancer Center, University of California San Diego, La Jolla, California, United States of America; Department of Pediatrics and Rady Children's Hospital, University of California San Diego, La Jolla, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Rassenti+L%22">Rassenti L</searchLink>; Moores Cancer Center, University of California San Diego, La Jolla, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Barrett+CL%22">Barrett CL</searchLink>; Moores Cancer Center, University of California San Diego, La Jolla, California, United States of America; Department of Pediatrics and Rady Children's Hospital, University of California San Diego, La Jolla, California, United States of America; Institute for Genomic Medicine, University of California San Diego, La Jolla, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Jepsen+K%22">Jepsen K</searchLink>; Institute for Genomic Medicine, University of California San Diego, La Jolla, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Jamieson+CH%22">Jamieson CH</searchLink>; Moores Cancer Center, University of California San Diego, La Jolla, California, United States of America; Department of Medicine, University of California San Diego, La Jolla, California, United States of America; Sanford Consortium for Regenerative Medicine, University of California San Diego, La Jolla, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Carson+D%22">Carson D</searchLink>; Moores Cancer Center, University of California San Diego, La Jolla, California, United States of America; Department of Medicine, University of California San Diego, La Jolla, California, United States of America; Sanford Consortium for Regenerative Medicine, University of California San Diego, La Jolla, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Kipps+TJ%22">Kipps TJ</searchLink>; Moores Cancer Center, University of California San Diego, La Jolla, California, United States of America.<br /><searchLink fieldCode="AU" term="%22Frazer+KA%22">Frazer KA</searchLink>; Moores Cancer Center, University of California San Diego, La Jolla, California, United States of America; Department of Pediatrics and Rady Children's Hospital, University of California San Diego, La Jolla, California, United States of America; Institute for Genomic Medicine, University of California San Diego, La Jolla, California, United States of America.
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  Data: <searchLink fieldCode="JN" term="%22101238922%22">PLoS computational biology</searchLink> [PLoS Comput Biol] 2015 Mar 13; Vol. 11 (3), pp. e1004105. <i>Date of Electronic Publication: </i>2015 Mar 13 (<i>Print Publication: </i>2015).
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