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Lisa: inferring transcriptional regulators through integrative modeling of public chromatin accessibility and ChIP-seq data.

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Title: Lisa: inferring transcriptional regulators through integrative modeling of public chromatin accessibility and ChIP-seq data.
Authors: Qin Q; Clinical Translational Research Center, Shanghai Pulmonary Hospital, School of Life Science and Technology, Tongji University, Shanghai, 200433, China.; Center of Molecular Medicine, Children's Hospital of Fudan University, Shanghai, 201102, China., Fan J; Clinical Translational Research Center, Shanghai Pulmonary Hospital, School of Life Science and Technology, Tongji University, Shanghai, 200433, China., Zheng R; Clinical Translational Research Center, Shanghai Pulmonary Hospital, School of Life Science and Technology, Tongji University, Shanghai, 200433, China., Wan C; Clinical Translational Research Center, Shanghai Pulmonary Hospital, School of Life Science and Technology, Tongji University, Shanghai, 200433, China., Mei S; Clinical Translational Research Center, Shanghai Pulmonary Hospital, School of Life Science and Technology, Tongji University, Shanghai, 200433, China., Wu Q; Clinical Translational Research Center, Shanghai Pulmonary Hospital, School of Life Science and Technology, Tongji University, Shanghai, 200433, China., Sun H; Clinical Translational Research Center, Shanghai Pulmonary Hospital, School of Life Science and Technology, Tongji University, Shanghai, 200433, China., Brown M; Department of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA, 02215, USA.; Department of Data Sciences, Dana-Farber Cancer Institute and Harvard T.H. Chan School of Public Health, Boston, MA, 02215, USA., Zhang J; Stem Cell Translational Research Center, Tongji Hospital, School of Life Science and Technology, Tongji University, Shanghai, 200065, China. zhangjing@tongji.edu.cn., Meyer CA; Center for Functional Cancer Epigenetics, Dana-Farber Cancer Institute, Boston, MA, 02215, USA. cliff_meyer@ds.dfci.harvard.edu.; Department of Data Sciences, Dana-Farber Cancer Institute and Harvard T.H. Chan School of Public Health, Boston, MA, 02215, USA. cliff_meyer@ds.dfci.harvard.edu., Liu XS; Center for Functional Cancer Epigenetics, Dana-Farber Cancer Institute, Boston, MA, 02215, USA. xsliu@ds.dfci.harvard.edu.; Department of Data Sciences, Dana-Farber Cancer Institute and Harvard T.H. Chan School of Public Health, Boston, MA, 02215, USA. xsliu@ds.dfci.harvard.edu.
Source: Genome biology [Genome Biol] 2020 Feb 07; Vol. 21 (1), pp. 32. Date of Electronic Publication: 2020 Feb 07.
Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Lisa: inferring transcriptional regulators through integrative modeling of public chromatin accessibility and ChIP-seq data.
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  Data: <searchLink fieldCode="AU" term="%22Qin+Q%22">Qin Q</searchLink>; Clinical Translational Research Center, Shanghai Pulmonary Hospital, School of Life Science and Technology, Tongji University, Shanghai, 200433, China.; Center of Molecular Medicine, Children's Hospital of Fudan University, Shanghai, 201102, China.<br /><searchLink fieldCode="AU" term="%22Fan+J%22">Fan J</searchLink>; Clinical Translational Research Center, Shanghai Pulmonary Hospital, School of Life Science and Technology, Tongji University, Shanghai, 200433, China.<br /><searchLink fieldCode="AU" term="%22Zheng+R%22">Zheng R</searchLink>; Clinical Translational Research Center, Shanghai Pulmonary Hospital, School of Life Science and Technology, Tongji University, Shanghai, 200433, China.<br /><searchLink fieldCode="AU" term="%22Wan+C%22">Wan C</searchLink>; Clinical Translational Research Center, Shanghai Pulmonary Hospital, School of Life Science and Technology, Tongji University, Shanghai, 200433, China.<br /><searchLink fieldCode="AU" term="%22Mei+S%22">Mei S</searchLink>; Clinical Translational Research Center, Shanghai Pulmonary Hospital, School of Life Science and Technology, Tongji University, Shanghai, 200433, China.<br /><searchLink fieldCode="AU" term="%22Wu+Q%22">Wu Q</searchLink>; Clinical Translational Research Center, Shanghai Pulmonary Hospital, School of Life Science and Technology, Tongji University, Shanghai, 200433, China.<br /><searchLink fieldCode="AU" term="%22Sun+H%22">Sun H</searchLink>; Clinical Translational Research Center, Shanghai Pulmonary Hospital, School of Life Science and Technology, Tongji University, Shanghai, 200433, China.<br /><searchLink fieldCode="AU" term="%22Brown+M%22">Brown M</searchLink>; Department of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA, 02215, USA.; Department of Data Sciences, Dana-Farber Cancer Institute and Harvard T.H. Chan School of Public Health, Boston, MA, 02215, USA.<br /><searchLink fieldCode="AU" term="%22Zhang+J%22">Zhang J</searchLink>; Stem Cell Translational Research Center, Tongji Hospital, School of Life Science and Technology, Tongji University, Shanghai, 200065, China. zhangjing@tongji.edu.cn.<br /><searchLink fieldCode="AU" term="%22Meyer+CA%22">Meyer CA</searchLink>; Center for Functional Cancer Epigenetics, Dana-Farber Cancer Institute, Boston, MA, 02215, USA. cliff_meyer@ds.dfci.harvard.edu.; Department of Data Sciences, Dana-Farber Cancer Institute and Harvard T.H. Chan School of Public Health, Boston, MA, 02215, USA. cliff_meyer@ds.dfci.harvard.edu.<br /><searchLink fieldCode="AU" term="%22Liu+XS%22">Liu XS</searchLink>; Center for Functional Cancer Epigenetics, Dana-Farber Cancer Institute, Boston, MA, 02215, USA. xsliu@ds.dfci.harvard.edu.; Department of Data Sciences, Dana-Farber Cancer Institute and Harvard T.H. Chan School of Public Health, Boston, MA, 02215, USA. xsliu@ds.dfci.harvard.edu.
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  Data: <searchLink fieldCode="JN" term="%22100960660%22">Genome biology</searchLink> [Genome Biol] 2020 Feb 07; Vol. 21 (1), pp. 32. <i>Date of Electronic Publication: </i>2020 Feb 07.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22BioMed+Central+Ltd%22">BioMed Central Ltd </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>100960660 <i>Publication Model: </i>Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>1474-760X (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2214747596%22">14747596 </searchLink><i>NLM ISO Abbreviation: </i>Genome Biol <i>Subsets: </i>MEDLINE
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              Text: 2020 Feb 07
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