View in EDS

A massively parallel barcoded sequencing pipeline enables generation of the first ORFeome and interactome map for rice.

Saved in:
Bibliographic Details
Title: A massively parallel barcoded sequencing pipeline enables generation of the first ORFeome and interactome map for rice.
Authors: Wierbowski SD; Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, NY 14853.; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853., Vo TV; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853., Falter-Braun P; Institute of Network Biology, Helmholtz Zentrum München, German Research Center for Environmental Health, 85764 Munich, Germany.; Microbe-Host Interactions, Faculty of Biology, Ludwig-Maximilians-Universität München, 80539 Munich, Germany., Jobe TO; Botanical Institute, Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, 50674 Cologne, Germany., Kruse LH; Plant Biology Section, School of Integrative Plant Sciences, Cornell University, Ithaca, NY 14853., Wei X; Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, NY 14853., Liang J; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853., Meyer MJ; Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, NY 14853.; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853., Akturk N; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853., Rivera-Erick CA; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853., Cordero NA; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853., Paramo MI; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853.; Department of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853., Shayhidin EE; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853., Bertolotti M; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853., Tippens ND; Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, NY 14853.; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853., Akther K; Section of Plant Breeding and Genetics, School of Integrated Plant Sciences, Cornell University, Ithaca, NY 14853-1901., Sharma R; School of Computational and Integrative Sciences, Jawaharlal Nehru University, New Delhi 110067, India., Katayose Y; Advanced Genomics Breeding Section, Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba, Ibaraki 305-8634, Japan., Salehi-Ashtiani K; Laboratory of Algal, Systems, and Synthetic Biology, Division of Science and Math, New York University Abu Dhabi, 129188, Abu Dhabi, United Arab Emirates.; Center for Cancer Systems Biology, Dana-Farber Cancer Institute, Boston, MA 02215.; Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA 02115.; Center for Genomics and Systems Biology, New York University Abu Dhabi, 129188, Abu Dhabi, United Arab Emirates., Hao T; Center for Cancer Systems Biology, Dana-Farber Cancer Institute, Boston, MA 02215.; Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA 02115., Ronald PC; Department of Plant Pathology, University of California, Davis, CA 95616.; The Genome Center, University of California, Davis, CA 95616.; Innovative Genomics Institute, Berkeley, CA 94704., Ecker JR; Howard Hughes Medical Institute, The Salk Institute for Biological Studies, La Jolla, CA 92037.; Plant Biology Laboratory, The Salk Institute for Biological Studies, La Jolla, CA 92037., Schweitzer PA; BRC Genomics Facility, Institute of Biotechnology, Cornell University, Ithaca, NY 14853., Kikuchi S; Plant Genome Research Unit, Division of Genome and Biodiversity Research, Agrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba 305-0856, Japan., Mizuno H; Department of Molecular Biology, National Institute of Agrobiological Resources, Tsukuba 305-0856, Japan., Hill DE; Center for Cancer Systems Biology, Dana-Farber Cancer Institute, Boston, MA 02215.; Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA 02115., Vidal M; Center for Cancer Systems Biology, Dana-Farber Cancer Institute, Boston, MA 02215.; Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA 02115., Moghe GD; Plant Biology Section, School of Integrative Plant Sciences, Cornell University, Ithaca, NY 14853., McCouch SR; Section of Plant Breeding and Genetics, School of Integrated Plant Sciences, Cornell University, Ithaca, NY 14853-1901; srm4@cornell.edu haiyuan.yu@cornell.edu., Yu H; Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, NY 14853; srm4@cornell.edu haiyuan.yu@cornell.edu.; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853.
Source: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2020 May 26; Vol. 117 (21), pp. 11836-11842. Date of Electronic Publication: 2020 May 12.
Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
Journal Info: Publisher: National Academy of Sciences Country of Publication: United States NLM ID: 7505876 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1091-6490 (Electronic) Linking ISSN: 00278424 NLM ISO Abbreviation: Proc Natl Acad Sci U S A Subsets: MEDLINE
Database: MEDLINE Ultimate
FullText Text:
  Availability: 0
Header DbId: mdl
DbLabel: MEDLINE Ultimate
An: 32398372
AccessLevel: 2
PubType: Academic Journal
PubTypeId: academicJournal
PreciseRelevancyScore: 0
IllustrationInfo
Items – Name: Title
  Label: Title
  Group: Ti
  Data: A massively parallel barcoded sequencing pipeline enables generation of the first ORFeome and interactome map for rice.
– Name: Author
  Label: Authors
  Group: Au
  Data: <searchLink fieldCode="AU" term="%22Wierbowski+SD%22">Wierbowski SD</searchLink>; Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, NY 14853.; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853.<br /><searchLink fieldCode="AU" term="%22Vo+TV%22">Vo TV</searchLink>; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853.<br /><searchLink fieldCode="AU" term="%22Falter-Braun+P%22">Falter-Braun P</searchLink>; Institute of Network Biology, Helmholtz Zentrum München, German Research Center for Environmental Health, 85764 Munich, Germany.; Microbe-Host Interactions, Faculty of Biology, Ludwig-Maximilians-Universität München, 80539 Munich, Germany.<br /><searchLink fieldCode="AU" term="%22Jobe+TO%22">Jobe TO</searchLink>; Botanical Institute, Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, 50674 Cologne, Germany.<br /><searchLink fieldCode="AU" term="%22Kruse+LH%22">Kruse LH</searchLink>; Plant Biology Section, School of Integrative Plant Sciences, Cornell University, Ithaca, NY 14853.<br /><searchLink fieldCode="AU" term="%22Wei+X%22">Wei X</searchLink>; Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, NY 14853.<br /><searchLink fieldCode="AU" term="%22Liang+J%22">Liang J</searchLink>; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853.<br /><searchLink fieldCode="AU" term="%22Meyer+MJ%22">Meyer MJ</searchLink>; Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, NY 14853.; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853.<br /><searchLink fieldCode="AU" term="%22Akturk+N%22">Akturk N</searchLink>; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853.<br /><searchLink fieldCode="AU" term="%22Rivera-Erick+CA%22">Rivera-Erick CA</searchLink>; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853.<br /><searchLink fieldCode="AU" term="%22Cordero+NA%22">Cordero NA</searchLink>; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853.<br /><searchLink fieldCode="AU" term="%22Paramo+MI%22">Paramo MI</searchLink>; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853.; Department of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853.<br /><searchLink fieldCode="AU" term="%22Shayhidin+EE%22">Shayhidin EE</searchLink>; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853.<br /><searchLink fieldCode="AU" term="%22Bertolotti+M%22">Bertolotti M</searchLink>; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853.<br /><searchLink fieldCode="AU" term="%22Tippens+ND%22">Tippens ND</searchLink>; Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, NY 14853.; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853.<br /><searchLink fieldCode="AU" term="%22Akther+K%22">Akther K</searchLink>; Section of Plant Breeding and Genetics, School of Integrated Plant Sciences, Cornell University, Ithaca, NY 14853-1901.<br /><searchLink fieldCode="AU" term="%22Sharma+R%22">Sharma R</searchLink>; School of Computational and Integrative Sciences, Jawaharlal Nehru University, New Delhi 110067, India.<br /><searchLink fieldCode="AU" term="%22Katayose+Y%22">Katayose Y</searchLink>; Advanced Genomics Breeding Section, Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba, Ibaraki 305-8634, Japan.<br /><searchLink fieldCode="AU" term="%22Salehi-Ashtiani+K%22">Salehi-Ashtiani K</searchLink>; Laboratory of Algal, Systems, and Synthetic Biology, Division of Science and Math, New York University Abu Dhabi, 129188, Abu Dhabi, United Arab Emirates.; Center for Cancer Systems Biology, Dana-Farber Cancer Institute, Boston, MA 02215.; Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA 02115.; Center for Genomics and Systems Biology, New York University Abu Dhabi, 129188, Abu Dhabi, United Arab Emirates.<br /><searchLink fieldCode="AU" term="%22Hao+T%22">Hao T</searchLink>; Center for Cancer Systems Biology, Dana-Farber Cancer Institute, Boston, MA 02215.; Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA 02115.<br /><searchLink fieldCode="AU" term="%22Ronald+PC%22">Ronald PC</searchLink>; Department of Plant Pathology, University of California, Davis, CA 95616.; The Genome Center, University of California, Davis, CA 95616.; Innovative Genomics Institute, Berkeley, CA 94704.<br /><searchLink fieldCode="AU" term="%22Ecker+JR%22">Ecker JR</searchLink>; Howard Hughes Medical Institute, The Salk Institute for Biological Studies, La Jolla, CA 92037.; Plant Biology Laboratory, The Salk Institute for Biological Studies, La Jolla, CA 92037.<br /><searchLink fieldCode="AU" term="%22Schweitzer+PA%22">Schweitzer PA</searchLink>; BRC Genomics Facility, Institute of Biotechnology, Cornell University, Ithaca, NY 14853.<br /><searchLink fieldCode="AU" term="%22Kikuchi+S%22">Kikuchi S</searchLink>; Plant Genome Research Unit, Division of Genome and Biodiversity Research, Agrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba 305-0856, Japan.<br /><searchLink fieldCode="AU" term="%22Mizuno+H%22">Mizuno H</searchLink>; Department of Molecular Biology, National Institute of Agrobiological Resources, Tsukuba 305-0856, Japan.<br /><searchLink fieldCode="AU" term="%22Hill+DE%22">Hill DE</searchLink>; Center for Cancer Systems Biology, Dana-Farber Cancer Institute, Boston, MA 02215.; Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA 02115.<br /><searchLink fieldCode="AU" term="%22Vidal+M%22">Vidal M</searchLink>; Center for Cancer Systems Biology, Dana-Farber Cancer Institute, Boston, MA 02215.; Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA 02115.<br /><searchLink fieldCode="AU" term="%22Moghe+GD%22">Moghe GD</searchLink>; Plant Biology Section, School of Integrative Plant Sciences, Cornell University, Ithaca, NY 14853.<br /><searchLink fieldCode="AU" term="%22McCouch+SR%22">McCouch SR</searchLink>; Section of Plant Breeding and Genetics, School of Integrated Plant Sciences, Cornell University, Ithaca, NY 14853-1901; srm4@cornell.edu haiyuan.yu@cornell.edu.<br /><searchLink fieldCode="AU" term="%22Yu+H%22">Yu H</searchLink>; Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, NY 14853; srm4@cornell.edu haiyuan.yu@cornell.edu.; Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853.
– Name: TitleSource
  Label: Source
  Group: Src
  Data: <searchLink fieldCode="JN" term="%227505876%22">Proceedings of the National Academy of Sciences of the United States of America</searchLink> [Proc Natl Acad Sci U S A] 2020 May 26; Vol. 117 (21), pp. 11836-11842. <i>Date of Electronic Publication: </i>2020 May 12.
– Name: TypePub
  Label: Publication Type
  Group: TypPub
  Data: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
– Name: TitleSource
  Label: Journal Info
  Group: Src
  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22National+Academy+of+Sciences%22">National Academy of Sciences </searchLink><i>Country of Publication: </i>United States <i>NLM ID: </i>7505876 <i>Publication Model: </i>Print-Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>1091-6490 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2200278424%22">00278424 </searchLink><i>NLM ISO Abbreviation: </i>Proc Natl Acad Sci U S A <i>Subsets: </i>MEDLINE
PLink https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=32398372
RecordInfo BibRecord:
  BibEntity:
    Identifiers:
      – Type: doi
        Value: 10.1073/pnas.1918068117
    Languages:
      – Code: eng
        Text: English
    PhysicalDescription:
      Pagination:
        StartPage: 11836
    Titles:
      – TitleFull: A massively parallel barcoded sequencing pipeline enables generation of the first ORFeome and interactome map for rice.
        Type: main
  BibRelationships:
    HasContributorRelationships:
      – PersonEntity:
          Name:
            NameFull: Wierbowski SD
      – PersonEntity:
          Name:
            NameFull: Vo TV
      – PersonEntity:
          Name:
            NameFull: Falter-Braun P
      – PersonEntity:
          Name:
            NameFull: Jobe TO
      – PersonEntity:
          Name:
            NameFull: Kruse LH
      – PersonEntity:
          Name:
            NameFull: Wei X
      – PersonEntity:
          Name:
            NameFull: Liang J
      – PersonEntity:
          Name:
            NameFull: Meyer MJ
      – PersonEntity:
          Name:
            NameFull: Akturk N
      – PersonEntity:
          Name:
            NameFull: Rivera-Erick CA
      – PersonEntity:
          Name:
            NameFull: Cordero NA
      – PersonEntity:
          Name:
            NameFull: Paramo MI
      – PersonEntity:
          Name:
            NameFull: Shayhidin EE
      – PersonEntity:
          Name:
            NameFull: Bertolotti M
      – PersonEntity:
          Name:
            NameFull: Tippens ND
      – PersonEntity:
          Name:
            NameFull: Akther K
      – PersonEntity:
          Name:
            NameFull: Sharma R
      – PersonEntity:
          Name:
            NameFull: Katayose Y
      – PersonEntity:
          Name:
            NameFull: Salehi-Ashtiani K
      – PersonEntity:
          Name:
            NameFull: Hao T
      – PersonEntity:
          Name:
            NameFull: Ronald PC
      – PersonEntity:
          Name:
            NameFull: Ecker JR
      – PersonEntity:
          Name:
            NameFull: Schweitzer PA
      – PersonEntity:
          Name:
            NameFull: Kikuchi S
      – PersonEntity:
          Name:
            NameFull: Mizuno H
      – PersonEntity:
          Name:
            NameFull: Hill DE
      – PersonEntity:
          Name:
            NameFull: Vidal M
      – PersonEntity:
          Name:
            NameFull: Moghe GD
      – PersonEntity:
          Name:
            NameFull: McCouch SR
      – PersonEntity:
          Name:
            NameFull: Yu H
    IsPartOfRelationships:
      – BibEntity:
          Dates:
            – D: 26
              M: 05
              Text: 2020 May 26
              Type: published
              Y: 2020
          Identifiers:
            – Type: issn-electronic
              Value: 1091-6490
          Numbering:
            – Type: volume
              Value: 117
            – Type: issue
              Value: 21
          Titles:
            – TitleFull: Proceedings of the National Academy of Sciences of the United States of America
              Type: main
ResultId 1