Supervised enhancer prediction with epigenetic pattern recognition and targeted validation.

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Title: Supervised enhancer prediction with epigenetic pattern recognition and targeted validation.
Authors: Sethi A; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Gu M; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA.; Department of Computer Science, Yale University, New Haven, CT, USA., Gumusgoz E; Department of Internal Medicine, Section of Infectious Diseases, Yale University School of Medicine, New Haven, CT, USA., Chan L; School of Medicine, The Chinese University of Hong Kong, Hong Kong, China., Yan KK; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Rozowsky J; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Barozzi I; Functional Genomics Department, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Afzal V; Functional Genomics Department, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Akiyama JA; Functional Genomics Department, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Plajzer-Frick I; Functional Genomics Department, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Yan C; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Novak CS; Functional Genomics Department, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Kato M; Functional Genomics Department, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Garvin TH; Functional Genomics Department, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Pham Q; Functional Genomics Department, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Harrington A; Functional Genomics Department, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Mannion BJ; Functional Genomics Department, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Lee EA; Functional Genomics Department, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Fukuda-Yuzawa Y; Functional Genomics Department, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Visel A; Functional Genomics Department, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Dickel DE; Functional Genomics Department, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Yip KY; Department of Computer Science, The Chinese University of Hong Kong, Hong Kong, China., Sutton R; Department of Internal Medicine, Section of Infectious Diseases, Yale University School of Medicine, New Haven, CT, USA., Pennacchio LA; Functional Genomics Department, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Gerstein M; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA. mark@gersteinlab.org.; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA. mark@gersteinlab.org.; Department of Computer Science, Yale University, New Haven, CT, USA. mark@gersteinlab.org.
Source: Nature methods [Nat Methods] 2020 Aug; Vol. 17 (8), pp. 807-814. Date of Electronic Publication: 2020 Jul 29.
Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
Journal Info: Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1548-7105 (Electronic) Linking ISSN: 15487091 NLM ISO Abbreviation: Nat Methods Subsets: MEDLINE
Database: MEDLINE Ultimate
Description
ISSN:1548-7105
DOI:10.1038/s41592-020-0907-8