Emergence and phenotypic characterization of the global SARS-CoV-2 C.1.2 lineage.
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| Title: | Emergence and phenotypic characterization of the global SARS-CoV-2 C.1.2 lineage. |
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| Authors: | Scheepers C; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa.; SA MRC Antibody Immunity Research Unit, School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, 2132, Johannesburg, South Africa., Everatt J; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa., Amoako DG; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa., Tegally H; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, 4001, Durban, South Africa.; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, 7600, Stellenbosch, South Africa., Wibmer CK; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa., Mnguni A; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa., Ismail A; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa., Mahlangu B; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa., Lambson BE; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa.; SA MRC Antibody Immunity Research Unit, School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, 2132, Johannesburg, South Africa., Martin DP; Institute of Infectious Disease and Molecular Medicine, University of Cape Town, 7925, Cape Town, South Africa., Wilkinson E; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, 4001, Durban, South Africa.; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, 7600, Stellenbosch, South Africa., San JE; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, 4001, Durban, South Africa.; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, 7600, Stellenbosch, South Africa., Giandhari J; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, 4001, Durban, South Africa., Manamela N; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa.; SA MRC Antibody Immunity Research Unit, School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, 2132, Johannesburg, South Africa., Ntuli N; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa., Kgagudi P; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa.; SA MRC Antibody Immunity Research Unit, School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, 2132, Johannesburg, South Africa., Cele S; Africa Health Research Institute, 4001, Durban, South Africa.; School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, 4041, Durban, South Africa., Richardson SI; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa.; SA MRC Antibody Immunity Research Unit, School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, 2132, Johannesburg, South Africa., Pillay S; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, 4001, Durban, South Africa., Mohale T; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa., Ramphal U; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, 4001, Durban, South Africa., Naidoo Y; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, 4001, Durban, South Africa.; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, 7600, Stellenbosch, South Africa., Khumalo ZT; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa.; Department of Veterinary Tropical Diseases, Faculty of Veterinary Science, University of Pretoria, 0110, Onderstepoort, South Africa., Kwatra G; South African Medical Research Council Vaccines and Infectious Diseases Analytics Research Unit, University of the Witwatersrand, 2000, Johannesburg, South Africa.; Department of Clinical Microbiology, Christian Medical College, Vellore, 632004, India., Gray G; South African Medical Research Council, 7505, Cape Town, South Africa., Bekker LG; Desmond Tutu HIV Centre, 7925, Cape Town, South Africa., Madhi SA; South African Medical Research Council Vaccines and Infectious Diseases Analytics Research Unit, University of the Witwatersrand, 2000, Johannesburg, South Africa., Baillie V; South African Medical Research Council Vaccines and Infectious Diseases Analytics Research Unit, University of the Witwatersrand, 2000, Johannesburg, South Africa., Van Voorhis WC; Center for Emerging and Re-emerging Infectious Diseases (CERID), University of Washington, Washington, 98195, USA., Treurnicht FK; National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa.; Faculty of Health Sciences, University of the Witwatersrand, 2193, Johannesburg, South Africa., Venter M; Zoonotic Arbo and Respiratory Virus Research Programme, Department of Medical Virology, Faculty of Health, University of Pretoria, 0031, Gezina, South Africa., Mlisana K; School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, 4041, Durban, South Africa.; National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa.; Clinical Microbiology and Infectious Diseases Unit, Faulty of Health Sciences, University of Witwatersrand, 2132, Johannesburg, South Africa., Wolter N; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa.; Faculty of Health Sciences, University of the Witwatersrand, 2193, Johannesburg, South Africa., Sigal A; Africa Health Research Institute, 4001, Durban, South Africa.; School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, 4041, Durban, South Africa.; Max Planck Institute for Infection Biology, 10117, Berlin, Germany., Williamson C; Institute of Infectious Disease and Molecular Medicine, University of Cape Town, 7925, Cape Town, South Africa.; National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa.; Wellcome Centre for Infectious Diseases Research in Africa (CIDRI-Africa), 7925, Cape Town, South Africa., Hsiao NY; Institute of Infectious Disease and Molecular Medicine, University of Cape Town, 7925, Cape Town, South Africa.; National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa.; Wellcome Centre for Infectious Diseases Research in Africa (CIDRI-Africa), 7925, Cape Town, South Africa., Msomi N; National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa.; Discipline of Virology, University of KwaZulu-Natal, 4041, Durban, South Africa., Maponga T; Division of Medical Virology, Faculty of Medicine and Health Sciences, Stellenbosch University, Tygerberg, 7602, Cape Town, South Africa., Preiser W; National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa.; Division of Medical Virology, Faculty of Medicine and Health Sciences, Stellenbosch University, Tygerberg, 7602, Cape Town, South Africa., Makatini Z; National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa.; Faculty of Health Sciences, University of the Witwatersrand, 2193, Johannesburg, South Africa., Lessells R; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, 4001, Durban, South Africa., Moore PL; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa.; SA MRC Antibody Immunity Research Unit, School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, 2132, Johannesburg, South Africa.; Institute of Infectious Disease and Molecular Medicine, University of Cape Town, 7925, Cape Town, South Africa.; Centre for the AIDS Programme of Research in South Africa (CAPRISA), 4013, KwaZulu-Natal, South Africa., de Oliveira T; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, 4001, Durban, South Africa.; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, 7600, Stellenbosch, South Africa., von Gottberg A; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa.; Faculty of Health Sciences, University of the Witwatersrand, 2193, Johannesburg, South Africa.; Faculty of Health Sciences, University of Cape Town, 7935, Cape Town, South Africa., Bhiman JN; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), 2131, Johannesburg, South Africa. jinalb@nicd.ac.za.; Faculty of Health Sciences, University of the Witwatersrand, 2193, Johannesburg, South Africa. jinalb@nicd.ac.za. |
| Source: | Nature communications [Nat Commun] 2022 Apr 08; Vol. 13 (1), pp. 1976. Date of Electronic Publication: 2022 Apr 08. |
| Publication Type: | Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, P.H.S. |
| Journal Info: | Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
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| ISSN: | 2041-1723 |
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| DOI: | 10.1038/s41467-022-29579-9 |
