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Comparison of actionable events detected in cancer genomes by whole-genome sequencing, in silico whole-exome and mutation panels.

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Title: Comparison of actionable events detected in cancer genomes by whole-genome sequencing, in silico whole-exome and mutation panels.
Authors: Ramarao-Milne P; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia; Australian e-Health Research Centre, Commonwealth Scientific and Industrial Research Organisation, Brisbane, Australia., Kondrashova O; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia., Patch AM; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia., Nones K; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia., Koufariotis LT; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia., Newell F; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia., Addala V; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia., Lakis V; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia., Holmes O; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia., Leonard C; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia., Wood S; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia., Xu Q; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia., Mukhopadhyay P; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia., Naeini MM; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia., Steinfort D; Department of Thoracic Medicine, Royal Melbourne Hospital, Melbourne, Australia., Williamson JP; Department of Thoracic Medicine, Liverpool Hospital Sydney, Sydney, Australia., Bint M; Department of Thoracic Medicine, Sunshine Coast University Hospital, Birtinya, Australia., Pahoff C; Department of Respiratory Medicine, Gold Coast University Hospital, Southport, Australia., Nguyen PT; Department of Thoracic Medicine, Royal Adelaide Hospital, Adelaide, Australia., Twaddell S; Department of Respiratory and Sleep Medicine, John Hunter Hospital, Newcastle, Australia., Arnold D; Department of Respiratory and Sleep Medicine, John Hunter Hospital, Newcastle, Australia., Grainge C; Department of Respiratory and Sleep Medicine, John Hunter Hospital, Newcastle, Australia., Basirzadeh F; Department of Thoracic Medicine, Royal Brisbane and Women's Hospital, Brisbane, Australia., Fielding D; Department of Thoracic Medicine, Royal Brisbane and Women's Hospital, Brisbane, Australia., Dalley AJ; UQ Centre for Clinical Research, Faculty of Medicine, University of Queensland, Brisbane, Australia., Chittoory H; UQ Centre for Clinical Research, Faculty of Medicine, University of Queensland, Brisbane, Australia., Simpson PT; UQ Centre for Clinical Research, Faculty of Medicine, University of Queensland, Brisbane, Australia., Aoude LG; The University of Queensland Diamantina Institute, Faculty of Medicine, University of Queensland, Brisbane, Australia., Bonazzi VF; The University of Queensland Diamantina Institute, Faculty of Medicine, University of Queensland, Brisbane, Australia., Patel K; The University of Queensland Diamantina Institute, Faculty of Medicine, University of Queensland, Brisbane, Australia., Barbour AP; The University of Queensland Diamantina Institute, Faculty of Medicine, University of Queensland, Brisbane, Australia; Upper Gastro-intestinal Surgical Unit, Department of Surgery, Princess Alexandra Hospital, Brisbane, Australia., Fennell DA; Cancer Research UK Centre Leicester, University of Leicester & University Hospitals of Leicester NHS Trust, Leicester, UK., Robinson BW; National Centre for Asbestos Related Disease, Institute of Respiratory Health, University of Western Australia, Nedlands, Australia; Department of Respiratory Medicine, Sir Charles Gairdner Hospital, Nedlands, Australia., Creaney J; National Centre for Asbestos Related Disease, Institute of Respiratory Health, University of Western Australia, Nedlands, Australia; Department of Respiratory Medicine, Sir Charles Gairdner Hospital, Nedlands, Australia., Hollway G; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia., Pearson JV; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia., Waddell N; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia. Electronic address: Nic.waddell@qimrberghofer.edu.au.
Source: ESMO open [ESMO Open] 2022 Aug; Vol. 7 (4), pp. 100540. Date of Electronic Publication: 2022 Jul 15.
Publication Type: Journal Article; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Elsevier Country of Publication: England NLM ID: 101690685 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2059-7029 (Electronic) Linking ISSN: 20597029 NLM ISO Abbreviation: ESMO Open Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Comparison of actionable events detected in cancer genomes by whole-genome sequencing, in silico whole-exome and mutation panels.
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  Data: <searchLink fieldCode="AU" term="%22Ramarao-Milne+P%22">Ramarao-Milne P</searchLink>; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia; Australian e-Health Research Centre, Commonwealth Scientific and Industrial Research Organisation, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Kondrashova+O%22">Kondrashova O</searchLink>; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Patch+AM%22">Patch AM</searchLink>; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Nones+K%22">Nones K</searchLink>; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Koufariotis+LT%22">Koufariotis LT</searchLink>; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Newell+F%22">Newell F</searchLink>; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Addala+V%22">Addala V</searchLink>; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Lakis+V%22">Lakis V</searchLink>; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Holmes+O%22">Holmes O</searchLink>; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Leonard+C%22">Leonard C</searchLink>; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Wood+S%22">Wood S</searchLink>; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Xu+Q%22">Xu Q</searchLink>; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Mukhopadhyay+P%22">Mukhopadhyay P</searchLink>; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Naeini+MM%22">Naeini MM</searchLink>; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Steinfort+D%22">Steinfort D</searchLink>; Department of Thoracic Medicine, Royal Melbourne Hospital, Melbourne, Australia.<br /><searchLink fieldCode="AU" term="%22Williamson+JP%22">Williamson JP</searchLink>; Department of Thoracic Medicine, Liverpool Hospital Sydney, Sydney, Australia.<br /><searchLink fieldCode="AU" term="%22Bint+M%22">Bint M</searchLink>; Department of Thoracic Medicine, Sunshine Coast University Hospital, Birtinya, Australia.<br /><searchLink fieldCode="AU" term="%22Pahoff+C%22">Pahoff C</searchLink>; Department of Respiratory Medicine, Gold Coast University Hospital, Southport, Australia.<br /><searchLink fieldCode="AU" term="%22Nguyen+PT%22">Nguyen PT</searchLink>; Department of Thoracic Medicine, Royal Adelaide Hospital, Adelaide, Australia.<br /><searchLink fieldCode="AU" term="%22Twaddell+S%22">Twaddell S</searchLink>; Department of Respiratory and Sleep Medicine, John Hunter Hospital, Newcastle, Australia.<br /><searchLink fieldCode="AU" term="%22Arnold+D%22">Arnold D</searchLink>; Department of Respiratory and Sleep Medicine, John Hunter Hospital, Newcastle, Australia.<br /><searchLink fieldCode="AU" term="%22Grainge+C%22">Grainge C</searchLink>; Department of Respiratory and Sleep Medicine, John Hunter Hospital, Newcastle, Australia.<br /><searchLink fieldCode="AU" term="%22Basirzadeh+F%22">Basirzadeh F</searchLink>; Department of Thoracic Medicine, Royal Brisbane and Women's Hospital, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Fielding+D%22">Fielding D</searchLink>; Department of Thoracic Medicine, Royal Brisbane and Women's Hospital, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Dalley+AJ%22">Dalley AJ</searchLink>; UQ Centre for Clinical Research, Faculty of Medicine, University of Queensland, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Chittoory+H%22">Chittoory H</searchLink>; UQ Centre for Clinical Research, Faculty of Medicine, University of Queensland, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Simpson+PT%22">Simpson PT</searchLink>; UQ Centre for Clinical Research, Faculty of Medicine, University of Queensland, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Aoude+LG%22">Aoude LG</searchLink>; The University of Queensland Diamantina Institute, Faculty of Medicine, University of Queensland, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Bonazzi+VF%22">Bonazzi VF</searchLink>; The University of Queensland Diamantina Institute, Faculty of Medicine, University of Queensland, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Patel+K%22">Patel K</searchLink>; The University of Queensland Diamantina Institute, Faculty of Medicine, University of Queensland, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Barbour+AP%22">Barbour AP</searchLink>; The University of Queensland Diamantina Institute, Faculty of Medicine, University of Queensland, Brisbane, Australia; Upper Gastro-intestinal Surgical Unit, Department of Surgery, Princess Alexandra Hospital, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Fennell+DA%22">Fennell DA</searchLink>; Cancer Research UK Centre Leicester, University of Leicester & University Hospitals of Leicester NHS Trust, Leicester, UK.<br /><searchLink fieldCode="AU" term="%22Robinson+BW%22">Robinson BW</searchLink>; National Centre for Asbestos Related Disease, Institute of Respiratory Health, University of Western Australia, Nedlands, Australia; Department of Respiratory Medicine, Sir Charles Gairdner Hospital, Nedlands, Australia.<br /><searchLink fieldCode="AU" term="%22Creaney+J%22">Creaney J</searchLink>; National Centre for Asbestos Related Disease, Institute of Respiratory Health, University of Western Australia, Nedlands, Australia; Department of Respiratory Medicine, Sir Charles Gairdner Hospital, Nedlands, Australia.<br /><searchLink fieldCode="AU" term="%22Hollway+G%22">Hollway G</searchLink>; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Pearson+JV%22">Pearson JV</searchLink>; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia.<br /><searchLink fieldCode="AU" term="%22Waddell+N%22">Waddell N</searchLink>; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, Australia. Electronic address: Nic.waddell@qimrberghofer.edu.au.
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  Data: <searchLink fieldCode="JN" term="%22101690685%22">ESMO open</searchLink> [ESMO Open] 2022 Aug; Vol. 7 (4), pp. 100540. <i>Date of Electronic Publication: </i>2022 Jul 15.
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