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Nascent transcript O-MAP reveals the molecular architecture of a single-locus subnuclear compartment built by RBM20 and the TTN RNA.

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Title: Nascent transcript O-MAP reveals the molecular architecture of a single-locus subnuclear compartment built by RBM20 and the TTN RNA.
Authors: Kania EE; Department of Pharmacology, University of Washington, Seattle, WA, USA.; Institute of Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA, USA.; Brotman Baty Institute for Precision Medicine, Seattle, WA, USA.; Present affiliations: Shape Therapeutics, Seattle, WA (E.E.K); Department of Biology, Massachusetts Institute of Technology (D.M. M.); Department of Computer Science and Software Engineering, California Polytechnic State University at San Luis Obispo (B.H); Department of Stem Cell and Regenerative Medicine, and the Eli and Edyth Broad Center for Regenerative Medicine and Stem Cell Research, University of Southern California (C.E.M.)., Fenix A; Institute of Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA, USA.; Departments of Laboratory Medicine and Pathology, Bioengineering, and Medicine/Cardiology, University of Washington, Seattle, WA, USA., Marciniak DM; Department of Pharmacology, University of Washington, Seattle, WA, USA.; Present affiliations: Shape Therapeutics, Seattle, WA (E.E.K); Department of Biology, Massachusetts Institute of Technology (D.M. M.); Department of Computer Science and Software Engineering, California Polytechnic State University at San Luis Obispo (B.H); Department of Stem Cell and Regenerative Medicine, and the Eli and Edyth Broad Center for Regenerative Medicine and Stem Cell Research, University of Southern California (C.E.M.)., Lin Q; Department of Pharmacology, University of Washington, Seattle, WA, USA.; Institute of Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA, USA.; Brotman Baty Institute for Precision Medicine, Seattle, WA, USA.; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Bianchi S; Molecular Biotechnology Center 'Guido Tarone', Department of Molecular Biotechnology and Health Sciences, University of Turin, Torino, Italy., Hristov B; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Present affiliations: Shape Therapeutics, Seattle, WA (E.E.K); Department of Biology, Massachusetts Institute of Technology (D.M. M.); Department of Computer Science and Software Engineering, California Polytechnic State University at San Luis Obispo (B.H); Department of Stem Cell and Regenerative Medicine, and the Eli and Edyth Broad Center for Regenerative Medicine and Stem Cell Research, University of Southern California (C.E.M.)., Li S; Department of Pharmacology, University of Washington, Seattle, WA, USA.; Institute of Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA, USA.; Brotman Baty Institute for Precision Medicine, Seattle, WA, USA., Camplisson CK; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Fields R; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Beliveau BJ; Institute of Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA, USA.; Brotman Baty Institute for Precision Medicine, Seattle, WA, USA.; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Schweppe DK; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Noble WS; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Paul G. Allen School of Computer Science and Engineering, University of Washington, Seattle, USA., Ong SE; Department of Pharmacology, University of Washington, Seattle, WA, USA., Bertero A; Molecular Biotechnology Center 'Guido Tarone', Department of Molecular Biotechnology and Health Sciences, University of Turin, Torino, Italy., Murry CE; Institute of Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA, USA.; Departments of Laboratory Medicine and Pathology, Bioengineering, and Medicine/Cardiology, University of Washington, Seattle, WA, USA.; Present affiliations: Shape Therapeutics, Seattle, WA (E.E.K); Department of Biology, Massachusetts Institute of Technology (D.M. M.); Department of Computer Science and Software Engineering, California Polytechnic State University at San Luis Obispo (B.H); Department of Stem Cell and Regenerative Medicine, and the Eli and Edyth Broad Center for Regenerative Medicine and Stem Cell Research, University of Southern California (C.E.M.)., Shechner DM; Department of Pharmacology, University of Washington, Seattle, WA, USA.; Institute of Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA, USA.; Brotman Baty Institute for Precision Medicine, Seattle, WA, USA.
Source: BioRxiv : the preprint server for biology [bioRxiv] 2024 Nov 13. Date of Electronic Publication: 2024 Nov 13.
Publication Type: Journal Article; Preprint
Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE
Database: MEDLINE Ultimate
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  Data: Nascent transcript O-MAP reveals the molecular architecture of a single-locus subnuclear compartment built by RBM20 and the TTN RNA.
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  Data: <searchLink fieldCode="AU" term="%22Kania+EE%22">Kania EE</searchLink>; Department of Pharmacology, University of Washington, Seattle, WA, USA.; Institute of Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA, USA.; Brotman Baty Institute for Precision Medicine, Seattle, WA, USA.; Present affiliations: Shape Therapeutics, Seattle, WA (E.E.K); Department of Biology, Massachusetts Institute of Technology (D.M. M.); Department of Computer Science and Software Engineering, California Polytechnic State University at San Luis Obispo (B.H); Department of Stem Cell and Regenerative Medicine, and the Eli and Edyth Broad Center for Regenerative Medicine and Stem Cell Research, University of Southern California (C.E.M.).<br /><searchLink fieldCode="AU" term="%22Fenix+A%22">Fenix A</searchLink>; Institute of Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA, USA.; Departments of Laboratory Medicine and Pathology, Bioengineering, and Medicine/Cardiology, University of Washington, Seattle, WA, USA.<br /><searchLink fieldCode="AU" term="%22Marciniak+DM%22">Marciniak DM</searchLink>; Department of Pharmacology, University of Washington, Seattle, WA, USA.; Present affiliations: Shape Therapeutics, Seattle, WA (E.E.K); Department of Biology, Massachusetts Institute of Technology (D.M. M.); Department of Computer Science and Software Engineering, California Polytechnic State University at San Luis Obispo (B.H); Department of Stem Cell and Regenerative Medicine, and the Eli and Edyth Broad Center for Regenerative Medicine and Stem Cell Research, University of Southern California (C.E.M.).<br /><searchLink fieldCode="AU" term="%22Lin+Q%22">Lin Q</searchLink>; Department of Pharmacology, University of Washington, Seattle, WA, USA.; Institute of Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA, USA.; Brotman Baty Institute for Precision Medicine, Seattle, WA, USA.; Department of Genome Sciences, University of Washington, Seattle, WA, USA.<br /><searchLink fieldCode="AU" term="%22Bianchi+S%22">Bianchi S</searchLink>; Molecular Biotechnology Center 'Guido Tarone', Department of Molecular Biotechnology and Health Sciences, University of Turin, Torino, Italy.<br /><searchLink fieldCode="AU" term="%22Hristov+B%22">Hristov B</searchLink>; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Present affiliations: Shape Therapeutics, Seattle, WA (E.E.K); Department of Biology, Massachusetts Institute of Technology (D.M. M.); Department of Computer Science and Software Engineering, California Polytechnic State University at San Luis Obispo (B.H); Department of Stem Cell and Regenerative Medicine, and the Eli and Edyth Broad Center for Regenerative Medicine and Stem Cell Research, University of Southern California (C.E.M.).<br /><searchLink fieldCode="AU" term="%22Li+S%22">Li S</searchLink>; Department of Pharmacology, University of Washington, Seattle, WA, USA.; Institute of Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA, USA.; Brotman Baty Institute for Precision Medicine, Seattle, WA, USA.<br /><searchLink fieldCode="AU" term="%22Camplisson+CK%22">Camplisson CK</searchLink>; Department of Genome Sciences, University of Washington, Seattle, WA, USA.<br /><searchLink fieldCode="AU" term="%22Fields+R%22">Fields R</searchLink>; Department of Genome Sciences, University of Washington, Seattle, WA, USA.<br /><searchLink fieldCode="AU" term="%22Beliveau+BJ%22">Beliveau BJ</searchLink>; Institute of Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA, USA.; Brotman Baty Institute for Precision Medicine, Seattle, WA, USA.; Department of Genome Sciences, University of Washington, Seattle, WA, USA.<br /><searchLink fieldCode="AU" term="%22Schweppe+DK%22">Schweppe DK</searchLink>; Department of Genome Sciences, University of Washington, Seattle, WA, USA.<br /><searchLink fieldCode="AU" term="%22Noble+WS%22">Noble WS</searchLink>; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Paul G. Allen School of Computer Science and Engineering, University of Washington, Seattle, USA.<br /><searchLink fieldCode="AU" term="%22Ong+SE%22">Ong SE</searchLink>; Department of Pharmacology, University of Washington, Seattle, WA, USA.<br /><searchLink fieldCode="AU" term="%22Bertero+A%22">Bertero A</searchLink>; Molecular Biotechnology Center 'Guido Tarone', Department of Molecular Biotechnology and Health Sciences, University of Turin, Torino, Italy.<br /><searchLink fieldCode="AU" term="%22Murry+CE%22">Murry CE</searchLink>; Institute of Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA, USA.; Departments of Laboratory Medicine and Pathology, Bioengineering, and Medicine/Cardiology, University of Washington, Seattle, WA, USA.; Present affiliations: Shape Therapeutics, Seattle, WA (E.E.K); Department of Biology, Massachusetts Institute of Technology (D.M. M.); Department of Computer Science and Software Engineering, California Polytechnic State University at San Luis Obispo (B.H); Department of Stem Cell and Regenerative Medicine, and the Eli and Edyth Broad Center for Regenerative Medicine and Stem Cell Research, University of Southern California (C.E.M.).<br /><searchLink fieldCode="AU" term="%22Shechner+DM%22">Shechner DM</searchLink>; Department of Pharmacology, University of Washington, Seattle, WA, USA.; Institute of Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA, USA.; Brotman Baty Institute for Precision Medicine, Seattle, WA, USA.
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              Text: 2024 Nov 13
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