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Assessing the predicted impact of single amino acid substitutions in MAPK proteins for CAGI6 challenges.

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Title: Assessing the predicted impact of single amino acid substitutions in MAPK proteins for CAGI6 challenges.
Authors: Turina P; Department of Pharmacy and Biotechnology, University of Bologna, 40126, Bologna, Italy., Petrosino M; Department of Biochemical Sciences 'A. Rossi Fanelli', Sapienza University of Roma, 00185, Rome, Italy., Enriquez Sandoval CA; Department of Pharmacy and Biotechnology, University of Bologna, 40126, Bologna, Italy., Novak L; Department of Biochemical Sciences 'A. Rossi Fanelli', Sapienza University of Roma, 00185, Rome, Italy., Pasquo A; Diagnostics and Metrology Laboratory FSN-TECFIS-DIM, ENEA CR Frascati, 00044, Frascati, Italy., Alexov E; Department of Physics and Astronomy, Clemson University, Clemson, SC, 29634, USA., Alladin MA; Department of Computational and Data Sciences, Indian Institute of Science, Bangaluru, 560012, India., Ascher DB; Computational Biology and Clinical Informatics, Baker Heart and Diabetes Institute, Melbourne, VIC, 3004, Australia.; School of Chemistry and Molecular Biosciences, Australian Centre for Ecogenomics, University of Queensland, St Lucia, QLD, 4072, Australia., Babbi G; Department of Pharmacy and Biotechnology, University of Bologna, 40126, Bologna, Italy., Bakolitsa C; Department of Plant and Microbial Biology and Center for Computational Biology, University of California, Berkeley, CA, 94720, USA., Casadio R; Department of Pharmacy and Biotechnology, University of Bologna, 40126, Bologna, Italy., Cheng J; Department of Electrical Engineering and Computer Science, NextGen Precision Health Institute, University of Missouri, Columbia, MO, 65211, USA., Fariselli P; Department of Medical Sciences, University of Torino, 10126, Torino, Italy., Folkman L; Institute for Integrated and Intelligent Systems, Griffith University, Southport, QLD, 4222, Australia., Kamandula A; Khoury College of Computer Sciences, Northeastern University, Boston, MA, 02115, USA., Katsonis P; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA., Li M; School of Biology and Basic Medical Sciences, Suzhou Medical College of Soochow University, Suzhou, 215123, Jiangsu, China., Li D; Computational Biology and Bioinformatics, Université Libre de Bruxelles, 1050, Brussels, Belgium., Lichtarge O; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA., Mahmud S; Department of Electrical Engineering and Computer Science, NextGen Precision Health Institute, University of Missouri, Columbia, MO, 65211, USA., Martelli PL; Department of Pharmacy and Biotechnology, University of Bologna, 40126, Bologna, Italy., Pal D; Department of Computational and Data Sciences, Indian Institute of Science, Bangaluru, 560012, India., Panday SK; Department of Physics and Astronomy, Clemson University, Clemson, SC, 29634, USA., Pires DEV; School of Computing and Information Systems, The University of Melbourne, Melbourne, VIC, 3053, Australia., Portelli S; Computational Biology and Clinical Informatics, Baker Heart and Diabetes Institute, Melbourne, VIC, 3004, Australia.; School of Chemistry and Molecular Biosciences, Australian Centre for Ecogenomics, University of Queensland, St Lucia, QLD, 4072, Australia., Pucci F; Computational Biology and Bioinformatics, Université Libre de Bruxelles, 1050, Brussels, Belgium., Rodrigues CHM; Computational Biology and Clinical Informatics, Baker Heart and Diabetes Institute, Melbourne, VIC, 3004, Australia., Rooman M; Computational Biology and Bioinformatics, Université Libre de Bruxelles, 1050, Brussels, Belgium., Savojardo C; Department of Pharmacy and Biotechnology, University of Bologna, 40126, Bologna, Italy., Schwersensky M; Computational Biology and Bioinformatics, Université Libre de Bruxelles, 1050, Brussels, Belgium., Shen Y; Department of Electrical and Computer Engineering Texas, A&M University, College Station, TX, 77843, USA., Strokach AV; Department of Computer Science, University of Toronto, Toronto, ON, M5S 2E4, Canada., Sun Y; Department of Electrical and Computer Engineering Texas, A&M University, College Station, TX, 77843, USA., Woo J; 3 Billion, Seoul, South Korea., Radivojac P; Khoury College of Computer Sciences, Northeastern University, Boston, MA, 02115, USA., Brenner SE; Department of Plant and Microbial Biology and Center for Computational Biology, University of California, Berkeley, CA, 94720, USA.; Biophysics Graduate Group, University of California, Berkeley, Berkeley, CA, 94720, USA.; Center for Computational Biology, University of California, Berkeley, Berkeley, CA, 94720, USA., Chiaraluce R; Department of Biochemical Sciences 'A. Rossi Fanelli', Sapienza University of Roma, 00185, Rome, Italy. roberta.chiaraluce@uniroma1.it., Consalvi V; Department of Biochemical Sciences 'A. Rossi Fanelli', Sapienza University of Roma, 00185, Rome, Italy. valerio.consalvi@uniroma1.it., Capriotti E; Department of Pharmacy and Biotechnology, University of Bologna, 40126, Bologna, Italy. emidio.capriotti@unibo.it.; Computational Genomics Platform, IRCCS University Hospital of Bologna, 40138, Bologna, Italy. emidio.capriotti@unibo.it.
Source: Human genetics [Hum Genet] 2025 Mar; Vol. 144 (2-3), pp. 265-280. Date of Electronic Publication: 2025 Feb 20.
Publication Type: Journal Article
Journal Info: Publisher: Springer Verlag Country of Publication: Germany NLM ID: 7613873 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1432-1203 (Electronic) Linking ISSN: 03406717 NLM ISO Abbreviation: Hum Genet Subsets: MEDLINE
Database: MEDLINE Ultimate
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ISSN:1432-1203
DOI:10.1007/s00439-024-02724-8