Alignment-free viral sequence classification at scale.
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| Title: | Alignment-free viral sequence classification at scale. |
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| Authors: | van Zyl DJ; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa. danielvanzyl@sun.ac.za.; Computer Science Division, Department of Mathematical Sciences, Faculty of Science, Stellenbosch University, Stellenbosch, South Africa. danielvanzyl@sun.ac.za., Dunaiski M; Computer Science Division, Department of Mathematical Sciences, Faculty of Science, Stellenbosch University, Stellenbosch, South Africa., Tegally H; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa., Baxter C; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa.; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa., de Oliveira T; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa.; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa.; Kwazulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of Kwazulu-Natal, Durban, South Africa.; Department of Global Health, University of Washington, Seattle, USA., Xavier JS; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa.; Institute of Agricultural Sciences, Universidade Federal dos Vales do Jequitinhonha e Mucuri (UFVJM), Unaí, Brazil.; Institute of Biological Sciences, Universidade Federal de Minas Gerais (UFMG), Belo Horizonte, Brazil. |
| Corporate Authors: | INFORM Africa research study group |
| Source: | BMC genomics [BMC Genomics] 2025 Apr 18; Vol. 26 (1), pp. 389. Date of Electronic Publication: 2025 Apr 18. |
| Publication Type: | Journal Article |
| Journal Info: | Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
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| ISSN: | 1471-2164 |
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| DOI: | 10.1186/s12864-025-11554-5 |
