Transcriptome-wide analysis of differential expression in perturbation atlases.
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| Title: | Transcriptome-wide analysis of differential expression in perturbation atlases. |
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| Authors: | Nadig A; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA. anadig@broadinstitute.org.; Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA. anadig@broadinstitute.org.; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA. anadig@broadinstitute.org.; Center for Genomic Medicine, Massachusetts General Hospital, Boston, MA, USA. anadig@broadinstitute.org., Replogle JM; Department of Medicine, Massachusetts General Hospital, Boston, MA, USA. jreplogle@mgh.harvard.edu.; Medical Scientist Training Program, University of California San Francisco, San Francisco, CA, USA. jreplogle@mgh.harvard.edu.; Whitehead Institute for Biomedical Research, Massachusetts Institute of Technology, Cambridge, MA, USA. jreplogle@mgh.harvard.edu., Pogson AN; Whitehead Institute for Biomedical Research, Massachusetts Institute of Technology, Cambridge, MA, USA., Murthy M; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA., McCarroll SA; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Department of Genetics, Harvard Medical School, Boston, MA, USA.; Howard Hughes Medical Institute, Cambridge, MA, USA., Weissman JS; Whitehead Institute for Biomedical Research, Massachusetts Institute of Technology, Cambridge, MA, USA.; Howard Hughes Medical Institute, Cambridge, MA, USA.; David H. Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA, USA.; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA., Robinson EB; Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA.; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Center for Genomic Medicine, Massachusetts General Hospital, Boston, MA, USA., O'Connor LJ; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA. loconnor@broadinstitute.org.; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA. loconnor@broadinstitute.org. |
| Source: | Nature genetics [Nat Genet] 2025 May; Vol. 57 (5), pp. 1228-1237. Date of Electronic Publication: 2025 Apr 21. |
| Publication Type: | Journal Article |
| Journal Info: | Publisher: Nature Pub. Co Country of Publication: United States NLM ID: 9216904 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-1718 (Electronic) Linking ISSN: 10614036 NLM ISO Abbreviation: Nat Genet Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
| FullText | Text: Availability: 0 |
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| Header | DbId: mdl DbLabel: MEDLINE Ultimate An: 40259084 AccessLevel: 2 PubType: Academic Journal PubTypeId: academicJournal PreciseRelevancyScore: 0 |
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| Items | – Name: Title Label: Title Group: Ti Data: Transcriptome-wide analysis of differential expression in perturbation atlases. – Name: Author Label: Authors Group: Au Data: <searchLink fieldCode="AU" term="%22Nadig+A%22">Nadig A</searchLink>; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA. anadig@broadinstitute.org.; Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA. anadig@broadinstitute.org.; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA. anadig@broadinstitute.org.; Center for Genomic Medicine, Massachusetts General Hospital, Boston, MA, USA. anadig@broadinstitute.org.<br /><searchLink fieldCode="AU" term="%22Replogle+JM%22">Replogle JM</searchLink>; Department of Medicine, Massachusetts General Hospital, Boston, MA, USA. jreplogle@mgh.harvard.edu.; Medical Scientist Training Program, University of California San Francisco, San Francisco, CA, USA. jreplogle@mgh.harvard.edu.; Whitehead Institute for Biomedical Research, Massachusetts Institute of Technology, Cambridge, MA, USA. jreplogle@mgh.harvard.edu.<br /><searchLink fieldCode="AU" term="%22Pogson+AN%22">Pogson AN</searchLink>; Whitehead Institute for Biomedical Research, Massachusetts Institute of Technology, Cambridge, MA, USA.<br /><searchLink fieldCode="AU" term="%22Murthy+M%22">Murthy M</searchLink>; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA.<br /><searchLink fieldCode="AU" term="%22McCarroll+SA%22">McCarroll SA</searchLink>; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Department of Genetics, Harvard Medical School, Boston, MA, USA.; Howard Hughes Medical Institute, Cambridge, MA, USA.<br /><searchLink fieldCode="AU" term="%22Weissman+JS%22">Weissman JS</searchLink>; Whitehead Institute for Biomedical Research, Massachusetts Institute of Technology, Cambridge, MA, USA.; Howard Hughes Medical Institute, Cambridge, MA, USA.; David H. Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA, USA.; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.<br /><searchLink fieldCode="AU" term="%22Robinson+EB%22">Robinson EB</searchLink>; Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA.; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Center for Genomic Medicine, Massachusetts General Hospital, Boston, MA, USA.<br /><searchLink fieldCode="AU" term="%22O'Connor+LJ%22">O'Connor LJ</searchLink>; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA. loconnor@broadinstitute.org.; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA. loconnor@broadinstitute.org. – Name: TitleSource Label: Source Group: Src Data: <searchLink fieldCode="JN" term="%229216904%22">Nature genetics</searchLink> [Nat Genet] 2025 May; Vol. 57 (5), pp. 1228-1237. <i>Date of Electronic Publication: </i>2025 Apr 21. – Name: TypePub Label: Publication Type Group: TypPub Data: Journal Article – Name: TitleSource Label: Journal Info Group: Src Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Nature+Pub%2E+Co%22">Nature Pub. Co </searchLink><i>Country of Publication: </i>United States <i>NLM ID: </i>9216904 <i>Publication Model: </i>Print-Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>1546-1718 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2210614036%22">10614036 </searchLink><i>NLM ISO Abbreviation: </i>Nat Genet <i>Subsets: </i>MEDLINE |
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| RecordInfo | BibRecord: BibEntity: Identifiers: – Type: doi Value: 10.1038/s41588-025-02169-3 Languages: – Code: eng Text: English PhysicalDescription: Pagination: StartPage: 1228 Titles: – TitleFull: Transcriptome-wide analysis of differential expression in perturbation atlases. Type: main BibRelationships: HasContributorRelationships: – PersonEntity: Name: NameFull: Nadig A – PersonEntity: Name: NameFull: Replogle JM – PersonEntity: Name: NameFull: Pogson AN – PersonEntity: Name: NameFull: Murthy M – PersonEntity: Name: NameFull: McCarroll SA – PersonEntity: Name: NameFull: Weissman JS – PersonEntity: Name: NameFull: Robinson EB – PersonEntity: Name: NameFull: O'Connor LJ IsPartOfRelationships: – BibEntity: Dates: – D: 01 M: 05 Text: 2025 May Type: published Y: 2025 Identifiers: – Type: issn-electronic Value: 1546-1718 Numbering: – Type: volume Value: 57 – Type: issue Value: 5 Titles: – TitleFull: Nature genetics Type: main |
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