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Genome-to-genome analysis reveals associations between human and mycobacterial genetic variation in tuberculosis patients from Tanzania.

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Title: Genome-to-genome analysis reveals associations between human and mycobacterial genetic variation in tuberculosis patients from Tanzania.
Authors: Xu ZM; School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland., Zwyer M; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland., Hiza H; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland., Schmidiger S; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland., Sasamalo M; Ifakara Health Institute, Dar Es Salaam, Tanzania., Reinhard M; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland., Doetsch A; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland., Borrell S; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland., Naret O; School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland., Rüeger S; School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland., Lawless D; School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland., Tang S; School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland., Isihaka F; Ifakara Health Institute, Dar Es Salaam, Tanzania., Temba H; Ifakara Health Institute, Dar Es Salaam, Tanzania., Maroa T; Ifakara Health Institute, Dar Es Salaam, Tanzania., Naftari R; Ifakara Health Institute, Dar Es Salaam, Tanzania., Beisel C; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland., Hella J; Ifakara Health Institute, Dar Es Salaam, Tanzania., Reither K; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland., Brites D; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland., Portevin D; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland., Gagneux S; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland., Fellay J; School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland. jacques.fellay@epfl.ch.; Swiss Institute of Bioinformatics, Lausanne, Switzerland. jacques.fellay@epfl.ch.; Biomedical Data Science Center, Lausanne University Hospital and University of Lausanne, Lausanne, Switzerland. jacques.fellay@epfl.ch.
Source: BMC medical genomics [BMC Med Genomics] 2025 Jun 02; Vol. 18 (1), pp. 99. Date of Electronic Publication: 2025 Jun 02.
Publication Type: Journal Article
Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101319628 Publication Model: Electronic Cited Medium: Internet ISSN: 1755-8794 (Electronic) Linking ISSN: 17558794 NLM ISO Abbreviation: BMC Med Genomics Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Genome-to-genome analysis reveals associations between human and mycobacterial genetic variation in tuberculosis patients from Tanzania.
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  Data: <searchLink fieldCode="AU" term="%22Xu+ZM%22">Xu ZM</searchLink>; School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Zwyer+M%22">Zwyer M</searchLink>; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Hiza+H%22">Hiza H</searchLink>; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Schmidiger+S%22">Schmidiger S</searchLink>; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Sasamalo+M%22">Sasamalo M</searchLink>; Ifakara Health Institute, Dar Es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Reinhard+M%22">Reinhard M</searchLink>; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Doetsch+A%22">Doetsch A</searchLink>; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Borrell+S%22">Borrell S</searchLink>; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Naret+O%22">Naret O</searchLink>; School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Rüeger+S%22">Rüeger S</searchLink>; School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Lawless+D%22">Lawless D</searchLink>; School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Tang+S%22">Tang S</searchLink>; School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Isihaka+F%22">Isihaka F</searchLink>; Ifakara Health Institute, Dar Es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Temba+H%22">Temba H</searchLink>; Ifakara Health Institute, Dar Es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Maroa+T%22">Maroa T</searchLink>; Ifakara Health Institute, Dar Es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Naftari+R%22">Naftari R</searchLink>; Ifakara Health Institute, Dar Es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Beisel+C%22">Beisel C</searchLink>; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Hella+J%22">Hella J</searchLink>; Ifakara Health Institute, Dar Es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Reither+K%22">Reither K</searchLink>; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Brites+D%22">Brites D</searchLink>; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Portevin+D%22">Portevin D</searchLink>; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Gagneux+S%22">Gagneux S</searchLink>; Swiss Tropical and Public Health Institute, Allschwil, Switzerland.; University of Basel, Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Fellay+J%22">Fellay J</searchLink>; School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland. jacques.fellay@epfl.ch.; Swiss Institute of Bioinformatics, Lausanne, Switzerland. jacques.fellay@epfl.ch.; Biomedical Data Science Center, Lausanne University Hospital and University of Lausanne, Lausanne, Switzerland. jacques.fellay@epfl.ch.
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  Data: <searchLink fieldCode="JN" term="%22101319628%22">BMC medical genomics</searchLink> [BMC Med Genomics] 2025 Jun 02; Vol. 18 (1), pp. 99. <i>Date of Electronic Publication: </i>2025 Jun 02.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22BioMed+Central%22">BioMed Central </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>101319628 <i>Publication Model: </i>Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>1755-8794 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2217558794%22">17558794 </searchLink><i>NLM ISO Abbreviation: </i>BMC Med Genomics <i>Subsets: </i>MEDLINE
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