Whole genome characterisation of DS-1-like G8P[4] rotavirus A strains circulating in South Africa between 2009 and 2021 reveals endemic sub-lineages and evidence of radical epitope changes.
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| Title: | Whole genome characterisation of DS-1-like G8P[4] rotavirus A strains circulating in South Africa between 2009 and 2021 reveals endemic sub-lineages and evidence of radical epitope changes. |
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| Authors: | Shange ND; Next Generation Sequencing Unit, School of Biomedical Sciences, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa; Division of Virology, School of Pathology, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa., Mogotsi MT; Next Generation Sequencing Unit, School of Biomedical Sciences, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa; Division of Virology, School of Pathology, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa., Ogunbayo AE; Next Generation Sequencing Unit, School of Biomedical Sciences, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa; Division of Virology, School of Pathology, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa., Page N; National Institute for Communicable Diseases, Johannesburg, Gauteng, South Africa., Sondlane H; Next Generation Sequencing Unit, School of Biomedical Sciences, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa; Division of Virology, School of Pathology, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa., Esona MD; Department of Virology, Sefako Makgatho Health Sciences University, Pretoria, Gauteng, South Africa., Kumwenda B; Biomedical Sciences Department, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi., Mhango C; Biomedical Sciences Department, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi; Malawi-Liverpool-Wellcome Programme, Queen Elizabeth Central Hospital Campus, Chipatala Avenue P.O. Box 30096 Chichiri, Blantyre 3, Malawi; Institute of Infection, Veterinary & Ecological Sciences, Faculty of Health and Life Sciences, University of Liverpool, UK., Kawonga F; Malawi-Liverpool-Wellcome Programme, Queen Elizabeth Central Hospital Campus, Chipatala Avenue P.O. Box 30096 Chichiri, Blantyre 3, Malawi; Institute of Infection, Veterinary & Ecological Sciences, Faculty of Health and Life Sciences, University of Liverpool, UK; Department of Medical Laboratory Sciences, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi., Matambo E; Biomedical Sciences Department, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi; Institute of Infection, Veterinary & Ecological Sciences, Faculty of Health and Life Sciences, University of Liverpool, UK; Department of Pharmacy, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi., Mingle SNK; Department of Electron Microscopy and Histopathology, Noguchi Memorial Institute for Medical Research, University of Ghana, P. O. Box LG 581, Legon, Accra, Ghana., Dennis FE; Department of Electron Microscopy and Histopathology, Noguchi Memorial Institute for Medical Research, University of Ghana, P. O. Box LG 581, Legon, Accra, Ghana., Khuzwayo JC; Malawi-Liverpool-Wellcome Programme, Queen Elizabeth Central Hospital Campus, Chipatala Avenue P.O. Box 30096 Chichiri, Blantyre 3, Malawi; Institute of Infection, Veterinary & Ecological Sciences, Faculty of Health and Life Sciences, University of Liverpool, UK; Department of Medical Laboratory Sciences, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi., Makoah NA; Division of Virology, School of Pathology, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa., Donato CM; Enteric Diseases Group, Murdoch Children's Research Institute, 50 Flemington Road, Parkville, Melbourne 3052, Australia., Nyaga MM; Next Generation Sequencing Unit, School of Biomedical Sciences, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa; Division of Virology, School of Pathology, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa. Electronic address: NyagaMM@ufs.ac.za. |
| Source: | Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases [Infect Genet Evol] 2025 Oct; Vol. 134, pp. 105818. Date of Electronic Publication: 2025 Sep 05. |
| Publication Type: | Journal Article |
| Journal Info: | Publisher: Elsevier Science Country of Publication: Netherlands NLM ID: 101084138 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1567-7257 (Electronic) Linking ISSN: 15671348 NLM ISO Abbreviation: Infect Genet Evol Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
| FullText | Text: Availability: 0 |
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| Header | DbId: mdl DbLabel: MEDLINE Ultimate An: 40915595 AccessLevel: 2 PubType: Academic Journal PubTypeId: academicJournal PreciseRelevancyScore: 0 |
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| Items | – Name: Title Label: Title Group: Ti Data: Whole genome characterisation of DS-1-like G8P[4] rotavirus A strains circulating in South Africa between 2009 and 2021 reveals endemic sub-lineages and evidence of radical epitope changes. – Name: Author Label: Authors Group: Au Data: <searchLink fieldCode="AU" term="%22Shange+ND%22">Shange ND</searchLink>; Next Generation Sequencing Unit, School of Biomedical Sciences, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa; Division of Virology, School of Pathology, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa.<br /><searchLink fieldCode="AU" term="%22Mogotsi+MT%22">Mogotsi MT</searchLink>; Next Generation Sequencing Unit, School of Biomedical Sciences, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa; Division of Virology, School of Pathology, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa.<br /><searchLink fieldCode="AU" term="%22Ogunbayo+AE%22">Ogunbayo AE</searchLink>; Next Generation Sequencing Unit, School of Biomedical Sciences, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa; Division of Virology, School of Pathology, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa.<br /><searchLink fieldCode="AU" term="%22Page+N%22">Page N</searchLink>; National Institute for Communicable Diseases, Johannesburg, Gauteng, South Africa.<br /><searchLink fieldCode="AU" term="%22Sondlane+H%22">Sondlane H</searchLink>; Next Generation Sequencing Unit, School of Biomedical Sciences, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa; Division of Virology, School of Pathology, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa.<br /><searchLink fieldCode="AU" term="%22Esona+MD%22">Esona MD</searchLink>; Department of Virology, Sefako Makgatho Health Sciences University, Pretoria, Gauteng, South Africa.<br /><searchLink fieldCode="AU" term="%22Kumwenda+B%22">Kumwenda B</searchLink>; Biomedical Sciences Department, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.<br /><searchLink fieldCode="AU" term="%22Mhango+C%22">Mhango C</searchLink>; Biomedical Sciences Department, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi; Malawi-Liverpool-Wellcome Programme, Queen Elizabeth Central Hospital Campus, Chipatala Avenue P.O. Box 30096 Chichiri, Blantyre 3, Malawi; Institute of Infection, Veterinary & Ecological Sciences, Faculty of Health and Life Sciences, University of Liverpool, UK.<br /><searchLink fieldCode="AU" term="%22Kawonga+F%22">Kawonga F</searchLink>; Malawi-Liverpool-Wellcome Programme, Queen Elizabeth Central Hospital Campus, Chipatala Avenue P.O. Box 30096 Chichiri, Blantyre 3, Malawi; Institute of Infection, Veterinary & Ecological Sciences, Faculty of Health and Life Sciences, University of Liverpool, UK; Department of Medical Laboratory Sciences, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.<br /><searchLink fieldCode="AU" term="%22Matambo+E%22">Matambo E</searchLink>; Biomedical Sciences Department, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi; Institute of Infection, Veterinary & Ecological Sciences, Faculty of Health and Life Sciences, University of Liverpool, UK; Department of Pharmacy, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.<br /><searchLink fieldCode="AU" term="%22Mingle+SNK%22">Mingle SNK</searchLink>; Department of Electron Microscopy and Histopathology, Noguchi Memorial Institute for Medical Research, University of Ghana, P. O. Box LG 581, Legon, Accra, Ghana.<br /><searchLink fieldCode="AU" term="%22Dennis+FE%22">Dennis FE</searchLink>; Department of Electron Microscopy and Histopathology, Noguchi Memorial Institute for Medical Research, University of Ghana, P. O. Box LG 581, Legon, Accra, Ghana.<br /><searchLink fieldCode="AU" term="%22Khuzwayo+JC%22">Khuzwayo JC</searchLink>; Malawi-Liverpool-Wellcome Programme, Queen Elizabeth Central Hospital Campus, Chipatala Avenue P.O. Box 30096 Chichiri, Blantyre 3, Malawi; Institute of Infection, Veterinary & Ecological Sciences, Faculty of Health and Life Sciences, University of Liverpool, UK; Department of Medical Laboratory Sciences, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.<br /><searchLink fieldCode="AU" term="%22Makoah+NA%22">Makoah NA</searchLink>; Division of Virology, School of Pathology, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa.<br /><searchLink fieldCode="AU" term="%22Donato+CM%22">Donato CM</searchLink>; Enteric Diseases Group, Murdoch Children's Research Institute, 50 Flemington Road, Parkville, Melbourne 3052, Australia.<br /><searchLink fieldCode="AU" term="%22Nyaga+MM%22">Nyaga MM</searchLink>; Next Generation Sequencing Unit, School of Biomedical Sciences, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa; Division of Virology, School of Pathology, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa. Electronic address: NyagaMM@ufs.ac.za. – Name: TitleSource Label: Source Group: Src Data: <searchLink fieldCode="JN" term="%22101084138%22">Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases</searchLink> [Infect Genet Evol] 2025 Oct; Vol. 134, pp. 105818. <i>Date of Electronic Publication: </i>2025 Sep 05. – Name: TypePub Label: Publication Type Group: TypPub Data: Journal Article – Name: TitleSource Label: Journal Info Group: Src Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Elsevier+Science%22">Elsevier Science </searchLink><i>Country of Publication: </i>Netherlands <i>NLM ID: </i>101084138 <i>Publication Model: </i>Print-Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>1567-7257 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2215671348%22">15671348 </searchLink><i>NLM ISO Abbreviation: </i>Infect Genet Evol <i>Subsets: </i>MEDLINE |
| PLink | https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=40915595 |
| RecordInfo | BibRecord: BibEntity: Identifiers: – Type: doi Value: 10.1016/j.meegid.2025.105818 Languages: – Code: eng Text: English PhysicalDescription: Pagination: StartPage: 105818 Titles: – TitleFull: Whole genome characterisation of DS-1-like G8P[4] rotavirus A strains circulating in South Africa between 2009 and 2021 reveals endemic sub-lineages and evidence of radical epitope changes. Type: main BibRelationships: HasContributorRelationships: – PersonEntity: Name: NameFull: Shange ND – PersonEntity: Name: NameFull: Mogotsi MT – PersonEntity: Name: NameFull: Ogunbayo AE – PersonEntity: Name: NameFull: Page N – PersonEntity: Name: NameFull: Sondlane H – PersonEntity: Name: NameFull: Esona MD – PersonEntity: Name: NameFull: Kumwenda B – PersonEntity: Name: NameFull: Mhango C – PersonEntity: Name: NameFull: Kawonga F – PersonEntity: Name: NameFull: Matambo E – PersonEntity: Name: NameFull: Mingle SNK – PersonEntity: Name: NameFull: Dennis FE – PersonEntity: Name: NameFull: Khuzwayo JC – PersonEntity: Name: NameFull: Makoah NA – PersonEntity: Name: NameFull: Donato CM – PersonEntity: Name: NameFull: Nyaga MM IsPartOfRelationships: – BibEntity: Dates: – D: 01 M: 10 Text: 2025 Oct Type: published Y: 2025 Identifiers: – Type: issn-electronic Value: 1567-7257 Numbering: – Type: volume Value: 134 Titles: – TitleFull: Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases Type: main |
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