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Innate immune molecular landscape following controlled human influenza virus infection.

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Title: Innate immune molecular landscape following controlled human influenza virus infection.
Authors: Thistlethwaite W; Lewis-Sigler Institute of Integrative Genomics, Princeton University, Princeton, NJ, USA., Vangeti S; Department of Neurology, Icahn School of Medicine at Mount Sinai, New York, NY, USA; Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, Stockholm, Sweden., Cheng WS; Department of Neurology, Icahn School of Medicine at Mount Sinai, New York, NY, USA., Agarwal P; Division of Infectious Diseases, Duke University, Durham, NC, USA., Cappuccio A; Department of Neurology, Icahn School of Medicine at Mount Sinai, New York, NY, USA., Wang W; Genomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA., Wei B; Department of Genetics, Stanford University School of Medicine, Stanford, CA, USA., Myers R; Division of Infectious Diseases, Duke University, Durham, NC, USA., Rubenstein AB; Department of Neurology, Icahn School of Medicine at Mount Sinai, New York, NY, USA., Chawla D; Pfizer, San Diego, CA, USA., Hariharan M; Genomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA., McClain MT; Division of Infectious Diseases, Duke University, Durham, NC, USA., Burke TW; Division of Infectious Diseases, Duke University, Durham, NC, USA., Kleinstein SH; Department of Pathology and Department of Immunobiology, Yale School of Medicine, New Haven, CT, USA., Ecker JR; Genomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA; Howard Hughes Medical Institute, The Salk Institute for Biological Studies, La Jolla, CA, USA., Woods CW; Division of Infectious Diseases, Duke University, Durham, NC, USA., Greenleaf WJ; Department of Genetics, Stanford University School of Medicine, Stanford, CA, USA., Chen X; Lewis-Sigler Institute of Integrative Genomics, Princeton University, Princeton, NJ, USA; Center for Computational Biology, Flatiron Institute, New York, NY, USA., Ramos I; Department of Neurology, Icahn School of Medicine at Mount Sinai, New York, NY, USA; Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA., Zaslavsky E; Department of Neurology, Icahn School of Medicine at Mount Sinai, New York, NY, USA., Evans TG; Barinthus Biotherapeutics, Oxford, UK., Troyanskaya OG; Lewis-Sigler Institute of Integrative Genomics, Princeton University, Princeton, NJ, USA; Center for Computational Biology, Flatiron Institute, New York, NY, USA; Department of Computer Science, Princeton University, Princeton, NJ, USA. Electronic address: ogt@genomics.princeton.edu., Sealfon SC; Department of Neurology, Icahn School of Medicine at Mount Sinai, New York, NY, USA. Electronic address: stuart.sealfon@mssm.edu.
Source: Cell reports [Cell Rep] 2025 Oct 28; Vol. 44 (10), pp. 116312. Date of Electronic Publication: 2025 Sep 16.
Publication Type: Journal Article
Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 101573691 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2211-1247 (Electronic) NLM ISO Abbreviation: Cell Rep Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: <searchLink fieldCode="AU" term="%22Thistlethwaite+W%22">Thistlethwaite W</searchLink>; Lewis-Sigler Institute of Integrative Genomics, Princeton University, Princeton, NJ, USA.<br /><searchLink fieldCode="AU" term="%22Vangeti+S%22">Vangeti S</searchLink>; Department of Neurology, Icahn School of Medicine at Mount Sinai, New York, NY, USA; Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, Stockholm, Sweden.<br /><searchLink fieldCode="AU" term="%22Cheng+WS%22">Cheng WS</searchLink>; Department of Neurology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Agarwal+P%22">Agarwal P</searchLink>; Division of Infectious Diseases, Duke University, Durham, NC, USA.<br /><searchLink fieldCode="AU" term="%22Cappuccio+A%22">Cappuccio A</searchLink>; Department of Neurology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Wang+W%22">Wang W</searchLink>; Genomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Wei+B%22">Wei B</searchLink>; Department of Genetics, Stanford University School of Medicine, Stanford, CA, USA.<br /><searchLink fieldCode="AU" term="%22Myers+R%22">Myers R</searchLink>; Division of Infectious Diseases, Duke University, Durham, NC, USA.<br /><searchLink fieldCode="AU" term="%22Rubenstein+AB%22">Rubenstein AB</searchLink>; Department of Neurology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Chawla+D%22">Chawla D</searchLink>; Pfizer, San Diego, CA, USA.<br /><searchLink fieldCode="AU" term="%22Hariharan+M%22">Hariharan M</searchLink>; Genomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22McClain+MT%22">McClain MT</searchLink>; Division of Infectious Diseases, Duke University, Durham, NC, USA.<br /><searchLink fieldCode="AU" term="%22Burke+TW%22">Burke TW</searchLink>; Division of Infectious Diseases, Duke University, Durham, NC, USA.<br /><searchLink fieldCode="AU" term="%22Kleinstein+SH%22">Kleinstein SH</searchLink>; Department of Pathology and Department of Immunobiology, Yale School of Medicine, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Ecker+JR%22">Ecker JR</searchLink>; Genomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA; Howard Hughes Medical Institute, The Salk Institute for Biological Studies, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Woods+CW%22">Woods CW</searchLink>; Division of Infectious Diseases, Duke University, Durham, NC, USA.<br /><searchLink fieldCode="AU" term="%22Greenleaf+WJ%22">Greenleaf WJ</searchLink>; Department of Genetics, Stanford University School of Medicine, Stanford, CA, USA.<br /><searchLink fieldCode="AU" term="%22Chen+X%22">Chen X</searchLink>; Lewis-Sigler Institute of Integrative Genomics, Princeton University, Princeton, NJ, USA; Center for Computational Biology, Flatiron Institute, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Ramos+I%22">Ramos I</searchLink>; Department of Neurology, Icahn School of Medicine at Mount Sinai, New York, NY, USA; Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Zaslavsky+E%22">Zaslavsky E</searchLink>; Department of Neurology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Evans+TG%22">Evans TG</searchLink>; Barinthus Biotherapeutics, Oxford, UK.<br /><searchLink fieldCode="AU" term="%22Troyanskaya+OG%22">Troyanskaya OG</searchLink>; Lewis-Sigler Institute of Integrative Genomics, Princeton University, Princeton, NJ, USA; Center for Computational Biology, Flatiron Institute, New York, NY, USA; Department of Computer Science, Princeton University, Princeton, NJ, USA. Electronic address: ogt@genomics.princeton.edu.<br /><searchLink fieldCode="AU" term="%22Sealfon+SC%22">Sealfon SC</searchLink>; Department of Neurology, Icahn School of Medicine at Mount Sinai, New York, NY, USA. Electronic address: stuart.sealfon@mssm.edu.
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  Data: <searchLink fieldCode="JN" term="%22101573691%22">Cell reports</searchLink> [Cell Rep] 2025 Oct 28; Vol. 44 (10), pp. 116312. <i>Date of Electronic Publication: </i>2025 Sep 16.
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