View in EDS HTML Full Text PDF Full Text

gplasCC: classification and recovery of plasmids from short-read sequencing data for any bacterial species.

Saved in:
Bibliographic Details
Title: gplasCC: classification and recovery of plasmids from short-read sequencing data for any bacterial species.
Authors: Paganini JA; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands., Kerkvliet JJ; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands., Jordan O; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands., Teunis G; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands., Plantinga NL; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands., Meneses R; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands., Willems RJL; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands., Arredondo-Alonso S; Department of Biostatistics, Faculty of Medicine, University of Oslo, Oslo 0372, Norway.; Parasites and Microbes, Wellcome Sanger Institute, Cambridge CB10 1RQ, UK., Schürch AC; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands.
Source: NAR genomics and bioinformatics [NAR Genom Bioinform] 2026 Mar 14; Vol. 8 (1), pp. lqag028. Date of Electronic Publication: 2026 Mar 14 (Print Publication: 2026).
Publication Type: Journal Article
Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101756213 Publication Model: eCollection Cited Medium: Internet ISSN: 2631-9268 (Electronic) Linking ISSN: 26319268 NLM ISO Abbreviation: NAR Genom Bioinform Subsets: MEDLINE
Database: MEDLINE Ultimate
Full text is not displayed to guests.
FullText Links:
  – Type: pdflink
Text:
  Availability: 1
Header DbId: mdl
DbLabel: MEDLINE Ultimate
An: 41837270
AccessLevel: 2
PubType: Academic Journal
PubTypeId: academicJournal
PreciseRelevancyScore: 0
IllustrationInfo
Items – Name: Title
  Label: Title
  Group: Ti
  Data: gplasCC: classification and recovery of plasmids from short-read sequencing data for any bacterial species.
– Name: Author
  Label: Authors
  Group: Au
  Data: <searchLink fieldCode="AU" term="%22Paganini+JA%22">Paganini JA</searchLink>; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Kerkvliet+JJ%22">Kerkvliet JJ</searchLink>; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Jordan+O%22">Jordan O</searchLink>; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Teunis+G%22">Teunis G</searchLink>; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Plantinga+NL%22">Plantinga NL</searchLink>; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Meneses+R%22">Meneses R</searchLink>; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Willems+RJL%22">Willems RJL</searchLink>; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Arredondo-Alonso+S%22">Arredondo-Alonso S</searchLink>; Department of Biostatistics, Faculty of Medicine, University of Oslo, Oslo 0372, Norway.; Parasites and Microbes, Wellcome Sanger Institute, Cambridge CB10 1RQ, UK.<br /><searchLink fieldCode="AU" term="%22Schürch+AC%22">Schürch AC</searchLink>; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands.
– Name: TitleSource
  Label: Source
  Group: Src
  Data: <searchLink fieldCode="JN" term="%22101756213%22">NAR genomics and bioinformatics</searchLink> [NAR Genom Bioinform] 2026 Mar 14; Vol. 8 (1), pp. lqag028. <i>Date of Electronic Publication: </i>2026 Mar 14 (<i>Print Publication: </i>2026).
– Name: TypePub
  Label: Publication Type
  Group: TypPub
  Data: Journal Article
– Name: TitleSource
  Label: Journal Info
  Group: Src
  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Oxford+University+Press%22">Oxford University Press </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>101756213 <i>Publication Model: </i>eCollection <i>Cited Medium: </i>Internet <i>ISSN: </i>2631-9268 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2226319268%22">26319268 </searchLink><i>NLM ISO Abbreviation: </i>NAR Genom Bioinform <i>Subsets: </i>MEDLINE
PLink https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=41837270
RecordInfo BibRecord:
  BibEntity:
    Identifiers:
      – Type: doi
        Value: 10.1093/nargab/lqag028
    Languages:
      – Code: eng
        Text: English
    PhysicalDescription:
      Pagination:
        StartPage: lqag028
    Titles:
      – TitleFull: gplasCC: classification and recovery of plasmids from short-read sequencing data for any bacterial species.
        Type: main
  BibRelationships:
    HasContributorRelationships:
      – PersonEntity:
          Name:
            NameFull: Paganini JA
      – PersonEntity:
          Name:
            NameFull: Kerkvliet JJ
      – PersonEntity:
          Name:
            NameFull: Jordan O
      – PersonEntity:
          Name:
            NameFull: Teunis G
      – PersonEntity:
          Name:
            NameFull: Plantinga NL
      – PersonEntity:
          Name:
            NameFull: Meneses R
      – PersonEntity:
          Name:
            NameFull: Willems RJL
      – PersonEntity:
          Name:
            NameFull: Arredondo-Alonso S
      – PersonEntity:
          Name:
            NameFull: Schürch AC
    IsPartOfRelationships:
      – BibEntity:
          Dates:
            – D: 14
              M: 03
              Text: 2026 Mar 14
              Type: published
              Y: 2026
          Identifiers:
            – Type: issn-electronic
              Value: 2631-9268
          Numbering:
            – Type: volume
              Value: 8
            – Type: issue
              Value: 1
          Titles:
            – TitleFull: NAR genomics and bioinformatics
              Type: main
ResultId 1