gplasCC: classification and recovery of plasmids from short-read sequencing data for any bacterial species.

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Title: gplasCC: classification and recovery of plasmids from short-read sequencing data for any bacterial species.
Authors: Paganini JA; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands., Kerkvliet JJ; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands., Jordan O; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands., Teunis G; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands., Plantinga NL; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands., Meneses R; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands., Willems RJL; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands., Arredondo-Alonso S; Department of Biostatistics, Faculty of Medicine, University of Oslo, Oslo 0372, Norway.; Parasites and Microbes, Wellcome Sanger Institute, Cambridge CB10 1RQ, UK., Schürch AC; Department of Medical Microbiology, University Medical Center Utrecht, Utrecht 3584CX, The Netherlands.
Source: NAR genomics and bioinformatics [NAR Genom Bioinform] 2026 Mar 14; Vol. 8 (1), pp. lqag028. Date of Electronic Publication: 2026 Mar 14 (Print Publication: 2026).
Publication Type: Journal Article
Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101756213 Publication Model: eCollection Cited Medium: Internet ISSN: 2631-9268 (Electronic) Linking ISSN: 26319268 NLM ISO Abbreviation: NAR Genom Bioinform Subsets: MEDLINE
Database: MEDLINE Ultimate
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ISSN:2631-9268
DOI:10.1093/nargab/lqag028