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HmmUFOtu: An HMM and phylogenetic placement based ultra-fast taxonomic assignment and OTU picking tool for microbiome amplicon sequencing studies.

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Title: HmmUFOtu: An HMM and phylogenetic placement based ultra-fast taxonomic assignment and OTU picking tool for microbiome amplicon sequencing studies.
Authors: Zheng Q; Department of Dermatology and Microbiology, Perelman School of Medicine, University of Pennsylvania, 421 Curie Blvd, BRB 1046/7, Philadelphia, PA, 19104, USA. zhengqi@pennmedicine.upenn.edu., Bartow-McKenney C; Genomics and Computational Biology Program, Department of Dermatology, University of Pennsylvania, Philadelphia, USA., Meisel JS; Genomics and Computational Biology Program, Department of Dermatology, University of Pennsylvania, Philadelphia, USA., Grice EA; Department of Dermatology and Microbiology, Perelman School of Medicine, University of Pennsylvania, 421 Curie Blvd, BRB 1046/7, Philadelphia, PA, 19104, USA. egrice@pennmedicine.upenn.edu.; Genomics and Computational Biology Program, Department of Dermatology, University of Pennsylvania, Philadelphia, USA. egrice@pennmedicine.upenn.edu.
Source: Genome biology [Genome Biol] 2018 Jun 27; Vol. 19 (1), pp. 82. Date of Electronic Publication: 2018 Jun 27.
Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: <searchLink fieldCode="AU" term="%22Zheng+Q%22">Zheng Q</searchLink>; Department of Dermatology and Microbiology, Perelman School of Medicine, University of Pennsylvania, 421 Curie Blvd, BRB 1046/7, Philadelphia, PA, 19104, USA. zhengqi@pennmedicine.upenn.edu.<br /><searchLink fieldCode="AU" term="%22Bartow-McKenney+C%22">Bartow-McKenney C</searchLink>; Genomics and Computational Biology Program, Department of Dermatology, University of Pennsylvania, Philadelphia, USA.<br /><searchLink fieldCode="AU" term="%22Meisel+JS%22">Meisel JS</searchLink>; Genomics and Computational Biology Program, Department of Dermatology, University of Pennsylvania, Philadelphia, USA.<br /><searchLink fieldCode="AU" term="%22Grice+EA%22">Grice EA</searchLink>; Department of Dermatology and Microbiology, Perelman School of Medicine, University of Pennsylvania, 421 Curie Blvd, BRB 1046/7, Philadelphia, PA, 19104, USA. egrice@pennmedicine.upenn.edu.; Genomics and Computational Biology Program, Department of Dermatology, University of Pennsylvania, Philadelphia, USA. egrice@pennmedicine.upenn.edu.
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  Data: <searchLink fieldCode="JN" term="%22100960660%22">Genome biology</searchLink> [Genome Biol] 2018 Jun 27; Vol. 19 (1), pp. 82. <i>Date of Electronic Publication: </i>2018 Jun 27.
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        Value: 10.1186/s13059-018-1450-0
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